RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 IGHV1-3A0A0C4DH29 117 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 A8MZ25 164 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 ZNF736B4DX44 427 aaPredicted RBP9.96□□□□□ -0.82
VPS29-211ENST00000553128 HSD17B6O14756 317 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 SH2D1BO14796 132 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.82
VPS29-211ENST00000553128 GLP1RP43220 463 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 F2RL1P55085 397 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 Q6P435 159 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 ACSM6Q6P461 480 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 CYP2R1Q6VVX0 501 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 OR6Q1Q8NGQ2 317 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 RFESDQ8TAC1 157 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 S1PR3Q99500 378 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 CHST5Q9GZS9 411 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 MOB1AQ9H8S9 216 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 PLEKHA1Q9HB21 404 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 IDI2-AS1Q9NZ38 188 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 MRM2Q9UI43 246 aaKnown RBP9.96□□□□□ -0.82
VPS29-211ENST00000553128 VSIG4Q9Y279 399 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 VPS13DQ5THJ4 4388 aa9.96□□□□□ -0.82
VPS29-211ENST00000553128 IGKV1-9A0A0C4DH69 117 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 FUOMA2VDF0 154 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 G3V318 75 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 SLC33A1O00400 549 aaPredicted RBP9.95□□□□□ -0.82
VPS29-211ENST00000553128 E2F6O75461 281 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 IGF1P05019 195 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 CSN2P05814 226 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 ATP6V1B2P21281 511 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
VPS29-211ENST00000553128 CXCR4P61073 352 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 ZNF816Q0VGE8 651 aaPredicted RBP9.95□□□□□ -0.82
VPS29-211ENST00000553128 TMEM236Q5W0B7 351 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 ZNF322Q6U7Q0 402 aaPredicted RBP9.95□□□□□ -0.82
VPS29-211ENST00000553128 IZUMO1Q8IYV9 350 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 HAVCR2Q8TDQ0 301 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 ASB17Q8WXJ9 295 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 RFT1Q96AA3 541 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 RASL11BQ9BPW5 248 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 FAM110AQ9BQ89 295 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 OSBPL10Q9BXB5 764 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 CALYQ9NYX4 217 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 SNX5Q9Y5X3 404 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 WSB1Q9Y6I7 421 aa9.95□□□□□ -0.82
VPS29-211ENST00000553128 TRAV39A0A0B4J263 110 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 HSPB6O14558 160 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 MPZL2O60487 215 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 GATBO75879 557 aaKnown RBP9.94□□□□□ -0.82
VPS29-211ENST00000553128 RPP14O95059 124 aaKnown RBP9.94□□□□□ -0.82
VPS29-211ENST00000553128 ZNF44P15621 663 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 MTNR1BP49286 362 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 ISL1P61371 349 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 CDK5Q00535 292 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 BNIP1Q12981 228 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 OR2T5Q6IEZ7 315 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 BCDIN3DQ7Z5W3 292 aaKnown RBP9.94□□□□□ -0.82
VPS29-211ENST00000553128 TMEM104Q8NE00 496 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 OR10X1Q8NGY0 326 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 OR2T10Q8NGZ9 312 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 OR2T29Q8NH02 315 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 COMMD4Q9H0A8 199 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 REEP1Q9H902 201 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 OR6C3Q9NZP0 311 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 KIF25Q9UIL4 384 aa9.94□□□□□ -0.82
VPS29-211ENST00000553128 IGHV4OR15-8A0A075B7B6 117 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 A0A087WW49 117 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 TCRBV5S2A0A599 114 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 SYT7O43581 403 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 CCDC22O60826 627 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 IL1AP01583 271 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 HTR1FP30939 366 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 SSTR5P35346 364 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 SOX6P35712 828 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 RBP2P50120 134 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 ATP1B3P54709 279 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 MTCP1P56278 107 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 ZP1P60852 638 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 PDZK1IP1Q13113 114 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 CDK5R1Q15078 307 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 TMEM65Q6PI78 240 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 SSX6Q7RTT6 188 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 TMEM179BQ7Z7N9 219 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 LYPD6Q86Y78 171 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 MNTQ99583 582 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 TMEM14AQ9Y6G1 99 aa9.93□□□□□ -0.82
VPS29-211ENST00000553128 ABCA13Q86UQ4 5058 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 MEIKINA0A087WXM9 373 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 NPIPB11E5RHQ5 1161 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 LINC01619G3V211 115 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 KDM4BO94953 1096 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 CYB5AP00167 134 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 MOSP00540 346 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
VPS29-211ENST00000553128 IFNA6P05013 189 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 HMGN1P05114 100 aa9.92□□□□□ -0.82
VPS29-211ENST00000553128 SLC2A2P11168 524 aaPredicted RBP9.92□□□□□ -0.82
VPS29-211ENST00000553128 ARSBP15848 533 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms