RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 NIPSNAP3BQ9BS92 247 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ZNF160Q9HCG1 818 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 CHST11Q9NPF2 352 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 GPR173Q9NS66 373 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 GNG13Q9P2W3 67 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 TMED3Q9Y3Q3 217 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ROS1P08922 2347 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 FAM230AA0A1W2PPH8 454 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 BLACEA4D250 179 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 LILRA5A6NI73 299 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ZFP92A6NM28 416 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 A6NNC1 897 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 MKRN2OSH3BPM6 223 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 GDF9O60383 454 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 IGHG1P01857 330 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 FOSL2P15408 326 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 CD200P41217 278 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
LIMA1-214ENST00000552783 RPL23AP62750 156 aaKnown RBP4.2□□□□□ -1.74
LIMA1-214ENST00000552783 GNB2P62879 340 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 RTP5Q14D33 572 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ZNF726P1Q15940 193 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 GPR157Q5UAW9 335 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ABLIM2Q6H8Q1 611 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 SLC22A25Q6T423 547 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 BEND4Q6ZU67 534 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 TMEM252Q8N6L7 170 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 SLC38A9Q8NBW4 561 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 Q96M66 194 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 ELOVL1Q9BW60 279 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 BCO1Q9HAY6 547 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 KIAA1456Q9P272 454 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 PIGLQ9Y2B2 252 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 PTRH2Q9Y3E5 179 aaKnown RBP4.2□□□□□ -1.74
LIMA1-214ENST00000552783 SPTA1P02549 2419 aa4.2□□□□□ -1.74
LIMA1-214ENST00000552783 CFAP47Q6ZTR5 3102 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 IGKV1-12A0A0C4DH73 117 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 SMCO3A2RU48 225 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 SERPINE3A8MV23 424 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 H3BMH7 237 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 TRAF3IP2O43734 574 aaPredicted RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 IGKV1D-12P01611 117 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CCL1P22362 96 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 AADACP22760 399 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 DUSP1P28562 367 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 HLA-DRB3P79483 266 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ABCA11PQ4W5N1 156 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ZNF506Q5JVG8 444 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 GUSBP11Q6P575 273 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 TEX38Q6PEX7 206 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ZNF295-AS1Q8N0V1 137 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 OR5L2Q8NGL0 311 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 M1APQ8TC57 530 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 HAS2Q92819 552 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 RBM14Q96PK6 669 aaKnown RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 RSG1Q9BU20 258 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 DDA1Q9BW61 102 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 TM2D1Q9BX74 207 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 UCK1Q9HA47 277 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CBLN4Q9NTU7 201 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 DKKL1Q9UK85 242 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 A0A0G2JRQ6 117 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 A0A1B0GU03 582 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 A0A1W2PQD3 144 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 RRP8O43159 456 aaKnown RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ZFAND5O76080 213 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 SRFP11831 508 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 OTX2P32243 289 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CXCL12P48061 93 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ERVS71-1P61550 626 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 TNFRSF9Q07011 255 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ZP4Q12836 540 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ALKBH2Q6NS38 261 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 LCN15Q6UWW0 184 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 SLC16A14Q7RTX9 510 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 STX12Q86Y82 276 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ZNF441Q8N8Z8 693 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 PLPPR1Q8TBJ4 325 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 POC1BQ8TC44 478 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 DNASE2BQ8WZ79 361 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 NDUFAF3Q9BU61 184 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 GPR87Q9BY21 358 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 AKIRIN1Q9H9L7 192 aaPredicted RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 P4HTMQ9NXG6 502 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 TP53TG5Q9Y2B4 290 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ELOA3CA0A087WX78 387 aaPredicted RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 A0A1B0GWJ7 208 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 HMGB3O15347 200 aaKnown RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 ADAM20O43506 726 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CNOT4O95628 575 aaKnown RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 LCATP04180 440 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 GLB1P16278 677 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 PAX9P55771 341 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 SRYQ05066 204 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CLN3Q13286 438 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 IL13RA2Q14627 380 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.19□□□□□ -1.74
LIMA1-214ENST00000552783 DOK3Q7L591 496 aa4.19□□□□□ -1.74
LIMA1-214ENST00000552783 CALHM1Q8IU99 346 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms