RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 A0A1W2PP11 408 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 NKX6-3A6NJ46 265 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 A6NJ64 397 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 F8VVB4 439 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 F8VWA3 439 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 LDLRAD4O15165 306 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 IGHV4-38-2P0DP08 117 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 HKR1P10072 659 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 DUSP1P28562 367 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 PRDX2P32119 198 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 PAX8Q06710 450 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 TAF9Q16594 264 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 PIGYQ3MUY2 71 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 NHLRC3Q5JS37 347 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 ATAD3CQ5T2N8 411 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 C15orf40Q8WUR7 153 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 Q96M66 194 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 TMEM246Q9BRR3 403 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 TM2D1Q9BX74 207 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 PLEKHJ1Q9NW61 149 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 RABL2AQ9UBK7 228 aaPredicted RBP11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 MIOXQ9UGB7 285 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 RABL2BQ9UNT1 228 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 SOX21Q9Y651 276 aaPredicted RBP11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 DYSFO75923 2080 aa11.53□□□□□ -0.56
SMARCC2-212ENST00000552566 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 RFPL4AA6NLU0 287 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 MCRIP1C9JLW8 97 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 RFPL4AL1F8VTS6 287 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 GEMIN2O14893 280 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 HAND1O96004 215 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 ELK1P19419 428 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 FUT3P21217 361 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 MNDAP41218 407 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 EFNB2P52799 333 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 ZNF146Q15072 292 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 TMEM69Q5SWH9 247 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 TEX36Q5VZQ5 186 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 LINC00299Q6ZSB3 139 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 Q6ZTK2 550 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 NLRC3Q7RTR2 1065 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 SLC36A1Q7Z2H8 476 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 LAX1Q8IWV1 398 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 OR5T2Q8NGG2 359 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 OR10R2Q8NGX6 335 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 RAB3CQ96E17 227 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 MED30Q96HR3 178 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 ZNF747Q9BV97 191 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 EXTL2Q9UBQ6 330 aa11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 MRPS7Q9Y2R9 242 aaKnown RBP11.52□□□□□ -0.57
SMARCC2-212ENST00000552566 TRAV18A0A075B6X5 111 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 TRAV40A0A0B4J280 105 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 FABP12A6NFH5 140 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 XRCC3O43542 346 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 FSTL3O95633 263 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 EIF4EP06730 217 aaKnown RBP11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 PSG2P11465 335 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 TNFSF8P32971 234 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 PITPNAQ00169 270 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 NKAPLQ5M9Q1 402 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 LYPD2Q6UXB3 125 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 DNTTIP1Q9H147 329 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 ZMAT3Q9HA38 289 aaKnown RBP11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
SMARCC2-212ENST00000552566 MDFIC2A0A1B0GVS7 189 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 SIRPB1O00241 398 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 TMPRSS2O15393 492 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 PDCD6O75340 191 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 OR2H2O95918 312 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 GYPAP02724 150 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 GLAP06280 429 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 CDK2P24941 298 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 HOXA4Q00056 320 aaPredicted RBP11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 PAX2Q02962 417 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 IL18Q14116 193 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 SLC9A3R2Q15599 337 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 PAN3Q58A45 887 aaKnown RBP11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 CNIH2Q6PI25 160 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 METAP1DQ6UB28 335 aaPredicted RBP11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 FAM131AQ6UXB0 335 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 DCDC5Q6ZRR9 648 aa11.5□□□□□ -0.57
SMARCC2-212ENST00000552566 ZNF561Q8N587 486 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms