RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	ZNF880	Q6PDB4	577 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	UNQ6126/PRO20091	Q6UXV3	157 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RELL2	Q8NC24	303 aa	Predicted RBP	11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR1S1	Q8NH92	325 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CNTNAP3B	Q96NU0	1288 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	AQP10	Q96PS8	301 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CNTNAP3	Q9BZ76	1288 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	INTS1	Q8N201	2190 aa	Known RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	IGKV1-6	A0A0C4DH72	117 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199		H0YL77	283 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TUSC2	O75896	110 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	IGLV1-44	P01699	117 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CECR9	P0C854	216 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PGA5	P0DJD9	388 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZNF44	P15621	663 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TUBG1	P23258	451 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	GNRHR	P30968	328 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	KCNJ3	P48549	501 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	S100A10	P60903	97 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZNF154	Q13106	437 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	C20orf204	Q6ZNR8	217 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	FAM185A	Q8N0U4	392 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SNIP1	Q8TAD8	396 aa	Known RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	GLYATL2	Q8WU03	294 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RBPMS	Q93062	196 aa	Known RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MSI2	Q96DH6	328 aa	Known RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	C18orf12	Q96KH6	178 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TUBG2	Q9NRH3	451 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TMEM100	Q9NV29	134 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SDHAF2	Q9NX18	166 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PFDN2	Q9UHV9	154 aa		11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PURG	Q9UJV8	347 aa	Known RBP	11.91	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MFSD2B	A6NFX1	497 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MSGN1	A6NI15	193 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TMEM210	A6NLX4	147 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199		K7EM74	188 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MPPED1	O15442	326 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	BEND4	Q6ZU67	534 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ASCL5	Q7RTU5	278 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	FAM219A	Q8IW50	185 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	LGI3	Q8N145	548 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR8G5	Q8NG78	346 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	STOML3	Q8TAV4	291 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	NRIP2	Q9BQI9	281 aa		11.9	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR5H1	A6NKK0	313 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199		H7C1Q1	480 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	CDIPT	O14735	213 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	CRYAB	P02511	175 aa	Known RBP	11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	GRP	P07492	148 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	ACAA1	P09110	424 aa	Predicted RBP	11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	ZNF250	P15622	560 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	RND3	P61587	244 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	FAM74A1	Q5RGS3	127 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	LYZL2	Q7Z4W2	148 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	LDLRAD3	Q86YD5	345 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	BCL2L14	Q9BZR8	327 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SHARPIN	Q9H0F6	387 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	CYTL1	Q9NRR1	136 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	TREM2	Q9NZC2	230 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	AMDHD2	Q9Y303	409 aa		11.9	□□□□□ -0.51
RAB3IP-216	ENST00000552199	FRY	Q5TBA9	3013 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	IGHV1-18	A0A0C4DH31	117 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	PHF1	O43189	567 aa	Predicted RBP	11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	MLNR	O43193	412 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	GLI4	P10075	376 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	KITLG	P21583	273 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	MDH2	P40926	338 aa	Known RBP	11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	NAAA	Q02083	359 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SNTB1	Q13884	538 aa	Known RBP	11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	PAN3	Q58A45	887 aa	Known RBP	11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	PCSK4	Q6UW60	755 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	FAM169B	Q8N8A8	192 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	ZNF565	Q8N9K5	539 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	OR4A4P	Q8NGN8	299 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SECTM1	Q8WVN6	248 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	TP53RK	Q96S44	253 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SLX1A	Q9BQ83	275 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	TINAG	Q9UJW2	476 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	FBXO9	Q9UK97	447 aa	Predicted RBP	11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	PCDHB10	Q9UN67	800 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	FAM215A	Q9Y5M1	114 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	ASPM	Q8IZT6	3477 aa		11.89	□□□□□ -0.51
RAB3IP-216	ENST00000552199	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	IGKV1D-13	A0A0B4J2D9	117 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	C3orf85	A0A1B0GTC6	90 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	GPR31	O00270	319 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SLC33A1	O00400	549 aa	Predicted RBP	11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SHOX	O15266	292 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	DEDD	O75618	318 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	NXPH2	O95156	264 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	OR2H2	O95918	312 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	IGKV1-13	P0DP09	117 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	TPT1	P13693	172 aa	Known RBP	11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	RCC1	P18754	421 aa	Predicted RBP	11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	HLA-DRB3	P79483	266 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	SMCO1	Q147U7	214 aa		11.88	□□□□□ -0.51
RAB3IP-216	ENST00000552199	ZNF146	Q15072	292 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms