RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 ARPC2O15144 300 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 MPZL2O60487 215 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 OR3A1P47881 315 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 RAB9AP51151 201 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF91Q05481 1191 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 EBI3Q14213 229 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 SPIN3Q5JUX0 258 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 OR8H3Q8N146 312 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 MAPKAPK5-AS1Q8N8E1 139 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 OR14K1Q8NGZ2 314 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 CADM1Q9BY67 442 aaKnown RBP9.46□□□□□ -0.9
SNRPF-204ENST00000552085 TOLLIPQ9H0E2 274 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 AMMECR1Q9Y4X0 333 aaPredicted RBP9.46□□□□□ -0.9
SNRPF-204ENST00000552085 TMEM14AQ9Y6G1 99 aa9.46□□□□□ -0.9
SNRPF-204ENST00000552085 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 A0A1B0GTI1 187 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 FAM230AA0A1W2PPH8 454 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 H3BN98 237 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 SRSF10O75494 262 aaKnown RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 RGS11O94810 467 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 IGLV1-40P01703 118 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 HMGN1P05114 100 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 SLC2A5P22732 501 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 RAB7AP51149 207 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 FUT6P51993 359 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 RIDAP52758 137 aaKnown RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 HCCSP53701 268 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 KPNB1Q14974 876 aaKnown RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 UTF1Q5T230 341 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 ELMOD2Q8IZ81 293 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 IQCF1Q8N6M8 205 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 OR4D6Q8NGJ1 314 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 OR9G1Q8NH87 305 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 RGP1Q92546 391 aaPredicted RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 EMG1Q92979 244 aaKnown RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
SNRPF-204ENST00000552085 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 ING3Q9NXR8 418 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 TAS2R1Q9NYW7 299 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 WSB1Q9Y6I7 421 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 UBR4Q5T4S7 5183 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 HSPG2P98160 4391 aa9.45□□□□□ -0.9
SNRPF-204ENST00000552085 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 TRBV2A0A0J9YWF9 115 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
SNRPF-204ENST00000552085 CCL1P22362 96 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 PRDX6P30041 224 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 PTGFRP43088 359 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 GK3PQ14409 553 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 SPATS1Q496A3 300 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 BCL2L15Q5TBC7 163 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 SLC25A26Q70HW3 274 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 CPOQ8IVL8 374 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 Q8N6K4 173 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 SLAMF9Q96A28 289 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 FLYWCH2Q96CP2 140 aaKnown RBP9.44□□□□□ -0.9
SNRPF-204ENST00000552085 NIPSNAP1Q9BPW8 284 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 REEP1Q9H902 201 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 U3KQV3 271 aa9.44□□□□□ -0.9
SNRPF-204ENST00000552085 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 A6NIN4 97 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF729A6NN14 1252 aaPredicted RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 PRR32B1ATL7 298 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 ENTPD6O75354 484 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 GATBO75879 557 aaKnown RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 CSN2P05814 226 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 SOX6P35712 828 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 ACTR3P61158 418 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 RPS7P62081 194 aaKnown RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 PPP1R8Q12972 351 aaKnown RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 MADCAM1Q13477 382 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 UBE2V2Q15819 145 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 FAM58AQ8N1B3 248 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 S1PR3Q99500 378 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 FEVQ99581 238 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 MNTQ99583 582 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 MAGIXQ9H6Y5 334 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 IL36RNQ9UBH0 155 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 OR52A1Q9UKL2 312 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
SNRPF-204ENST00000552085 SNX5Q9Y5X3 404 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 R4GMQ9 66 aa9.43□□□□□ -0.9
SNRPF-204ENST00000552085 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 ODAMA1E959 279 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 FAM90A10PA6NDY2 464 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 G3V318 75 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 J3QR06 171 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 SH2D1BO14796 132 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 TPPPO94811 219 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 HSPB1P04792 205 aaKnown RBP9.42□□□□□ -0.9
SNRPF-204ENST00000552085 NFYBP25208 207 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms