RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SCML1Q9UN30 329 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 SLC22A13Q9Y226 551 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 AP3M1Q9Y2T2 418 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 CACNG2Q9Y698 323 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
CPSF6-206ENST00000550987 TSPAN11A1L157 253 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TMEM114B3SHH9 223 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 PLPP1O14494 284 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 XRCC2O43543 280 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ICOSLGO75144 302 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SRSF10O75494 262 aaKnown RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ZMPSTE24O75844 475 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SCELO95171 688 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 FARS2O95363 451 aaKnown RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 UTS2O95399 124 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 HBE1P02100 147 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 PSKH1P11801 424 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 NR2C1P13056 603 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 GGT1P19440 569 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TEAD1P28347 426 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 CD70P32970 193 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 RFC3P40938 356 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SERPINB8P50452 374 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 OR2B6P58173 313 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ACTBP60709 375 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ACTG1P63261 375 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 LCN2P80188 198 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 MXD1Q05195 221 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 GGTLC2Q14390 218 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 IMPG1Q17R60 797 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TRMT5Q32P41 509 aaKnown RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SLC36A2Q495M3 483 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TPTE2P1Q5T6R2 138 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 APRG1Q8IVJ8 170 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SYS1Q8N2H4 156 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 STK40Q8N2I9 435 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 LRRC75AQ8NAA5 344 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SUMF2Q8NBJ7 301 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 OR56A4Q8NGH8 313 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 OR5D18Q8NGL1 313 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 WFDC5Q8TCV5 224 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 KLK6Q92876 244 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SMARCD1Q96GM5 515 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SERPINB11Q96P15 392 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 PARD6GQ9BYG4 376 aaPredicted RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 SLC22A4Q9H015 551 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 WDR54Q9H977 334 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ACP6Q9NPH0 428 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 BATF3Q9NR55 127 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 ST3GAL6Q9Y274 331 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TRAPPC4Q9Y296 219 aa3.72□□□□□ -1.81
CPSF6-206ENST00000550987 MRPS18BQ9Y676 258 aaKnown RBP3.72□□□□□ -1.81
CPSF6-206ENST00000550987 TRPM6Q9BX84 2022 aa3.71□□□□□ -1.81
CPSF6-206ENST00000550987 ZNF233A6NK53 670 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 H3BN98 237 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 M0R036 132 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 SIVA1O15304 175 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 SLC31A1O15431 190 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 CD5LO43866 347 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 CDC40O60508 579 aaKnown RBP eCLIP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RAD1O60671 282 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PSIP1O75475 530 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 MOSP00540 346 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 IGLV1-47P01700 117 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 SNRPAP09012 282 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PET100P0DJ07 73 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 IGHV3-43DP0DP04 118 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PGAM1P18669 254 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 GTF2H1P32780 548 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 KDELR2P33947 212 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 DRD3P35462 400 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 UGT2B10P36537 528 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 GPX4P36969 197 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 CSKP41240 450 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 MAGEA6P43360 314 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PSMD8P48556 350 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RGS6P49758 472 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 CDK9P50750 372 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RAB7AP51149 207 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 RPS15AP62244 130 aaKnown RBP3.71□□□□□ -1.82
CPSF6-206ENST00000550987 UNC119Q13432 240 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 NAB1Q13506 487 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PDK2Q15119 407 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 OR4D1Q15615 310 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 GUK1Q16774 197 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 DEFB133Q30KQ1 61 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 COX19Q49B96 90 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 CCDC58Q4VC31 144 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 PIGGQ5H8A4 983 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ADNP2Q6IQ32 1131 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 C3orf33Q6P1S2 294 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ACP7Q6ZNF0 438 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 Q6ZSR6 202 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 ZNF621Q6ZSS3 439 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 STRADAQ7RTN6 431 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 FAM71E2Q8N5Q1 922 aa3.71□□□□□ -1.82
CPSF6-206ENST00000550987 TRAM1L1Q8N609 369 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms