RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ING3Q9NXR8 418 aa13.99□□□□□ -0.17
CHMP1A-208ENST00000550102 OR6C3Q9NZP0 311 aa13.99□□□□□ -0.17
CHMP1A-208ENST00000550102 ST3GAL6Q9Y274 331 aa13.99□□□□□ -0.17
CHMP1A-208ENST00000550102 PKD1L1Q8TDX9 2849 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 TRAV24A0A0B4J272 114 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 FAM90A8PA6NJQ4 464 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 RGS10O43665 173 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 ATP6V1G2O95670 118 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 GLP1RP43220 463 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 KCNJ3P48549 501 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 GPR176Q14439 515 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 SLC22A6Q4U2R8 563 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 PRAMEF5Q5TYX0 476 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 OR52W1Q6IF63 320 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 HEPN1Q6WQI6 88 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 LHFPL4Q7Z7J7 247 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 CDH26Q8IXH8 852 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 MS4A15Q8N5U1 240 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 MUL1Q969V5 352 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 TMED9Q9BVK6 235 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 PPIL3Q9H2H8 161 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 DUSP21Q9H596 190 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 IFT22Q9H7X7 185 aa13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 MRPS28Q9Y2Q9 187 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-208ENST00000550102 ZNF729A6NN14 1252 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 OR7C1O76099 320 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 MAS1P04201 325 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 GTF2F2P13984 249 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 CRHBPP24387 322 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 CDK2P24941 298 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 PAX5Q02548 391 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 MPV17LQ2QL34 196 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 OLFML2AQ68BL7 652 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 AWAT2Q6E213 333 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 OR4D6Q8NGJ1 314 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 WFDC12Q8WWY7 111 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 UFD1Q92890 307 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 KIF25Q9UIL4 384 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
CHMP1A-208ENST00000550102 MEIKINA0A087WXM9 373 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 CLPSL1A2RUU4 121 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 PIN1P1O15428 100 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 MMP23AO75900 390 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 PAX6P26367 422 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 MINOS1Q5TGZ0 78 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 SGMS2Q8NHU3 365 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 NDNFQ8TB73 568 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 MALSU1Q96EH3 234 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 DPCDQ9BVM2 203 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 BARHL1Q9BZE3 327 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 CCDC90BQ9GZT6 254 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 SLITRK2Q9H156 845 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 NCOR1P1Q9H4R4 102 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 RAB18Q9NP72 206 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 MINOS1-NBL1R4GNA1 71 aa13.96□□□□□ -0.17
CHMP1A-208ENST00000550102 MGAM2Q2M2H8 2515 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 MEGF11A6BM72 1044 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 GEMIN2O14893 280 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 VHLP40337 213 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 GPR50Q13585 617 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM189A2Q15884 450 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 SSX2Q16385 188 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 LY6EQ16553 131 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 ACSM3Q53FZ2 586 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 RSBN1Q5VWQ0 802 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 LIPKQ5VXJ0 399 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 GLIPR1L1Q6UWM5 242 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 LIAT1Q6ZQX7 453 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 PRSS48Q7RTY5 328 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 RTN4RL2Q86UN3 420 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 SUMF2Q8NBJ7 301 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 PLPPR1Q8TBJ4 325 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 PHYHIPQ92561 330 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 MRPS24Q96EL2 167 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 UQCC2Q9BRT2 126 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 TCF7L1Q9HCS4 588 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 ABCB10Q9NRK6 738 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 ZNF581Q9P0T4 197 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 RAB26Q9ULW5 256 aa13.95□□□□□ -0.18
CHMP1A-208ENST00000550102 KBTBD11-OT1A0A1B0GTJ5 212 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 A0A1W2PP11 408 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 HSMCR30P0CW71 290 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 CD34P28906 385 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 INSL4Q14641 139 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 LDLRAD2Q5SZI1 272 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM27D1Q5T7N8 215 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 UNQ9370/PRO34162Q6UXP9 181 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 Q6ZSV7 163 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 DYNAPQ8N1N2 210 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 ABHD12Q8N2K0 398 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 ZNF565Q8N9K5 539 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 LINC01006Q8NI28 216 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 ZNF596Q8TC21 504 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 SPACA1Q9HBV2 294 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 ISYNA1Q9NPH2 558 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms