RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 DYRK2Q92630 601 aa17.52■□□□□ 0.39
VPS29-206ENST00000549578 TMEM186Q96B77 213 aa17.52■□□□□ 0.39
VPS29-206ENST00000549578 COQ2Q96H96 371 aa17.52■□□□□ 0.39
VPS29-206ENST00000549578 HIF1ANQ9NWT6 349 aa17.52■□□□□ 0.39
VPS29-206ENST00000549578 F8P00451 2351 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 IGHV2-70DA0A0C4DH43 119 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 UBE2QL1A1L167 161 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 A6NHS1 94 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 RAB27BO00194 218 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 ECDO95905 644 aaPredicted RBP17.51■□□□□ 0.39
VPS29-206ENST00000549578 GLIPR1P48060 266 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 P2RX3P56373 397 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 RPL31P62899 125 aaKnown RBP17.51■□□□□ 0.39
VPS29-206ENST00000549578 KRBOX4Q5JUW0 171 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 RAB40AQ8WXH6 277 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
VPS29-206ENST00000549578 ARHGAP5-AS1Q96IT6 56 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 SULT4A1Q9BR01 284 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 NUDT16L1Q9BRJ7 211 aaKnown RBP17.51■□□□□ 0.39
VPS29-206ENST00000549578 PLEKHJ1Q9NW61 149 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 WNK2Q9Y3S1 2297 aa17.51■□□□□ 0.39
VPS29-206ENST00000549578 TRAV20A0A0B4J274 112 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 H3BUI4 141 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 FOSL1P15407 271 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 FAM189A2Q15884 450 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 PLAC9Q5JTB6 97 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 UBE2NLQ5JXB2 153 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 GLCCI1Q86VQ1 547 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 CMTM4Q8IZR5 234 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 FAM185AQ8N0U4 392 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 OR10R2Q8NGX6 335 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 FAAP24Q9BTP7 215 aa17.5■□□□□ 0.39
VPS29-206ENST00000549578 SLIRPQ9GZT3 109 aaKnown RBP17.5■□□□□ 0.39
VPS29-206ENST00000549578 TRBV23-1A0A0A0MS06 115 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 PPIAL4CA0A0B4J2A2 164 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 A0A1W2PQ09 198 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 ENSAO43768 121 aaKnown RBP17.49■□□□□ 0.39
VPS29-206ENST00000549578 PPIAL4GP0DN37 164 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 KCNJ3P48549 501 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 DYNC1I2Q13409 638 aaKnown RBP17.49■□□□□ 0.39
VPS29-206ENST00000549578 RBM39Q14498 530 aaKnown RBP17.49■□□□□ 0.39
VPS29-206ENST00000549578 C11orf91Q3C1V1 193 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 RSBN1Q5VWQ0 802 aaPredicted RBP17.49■□□□□ 0.39
VPS29-206ENST00000549578 Q6ZTK2 550 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 LY6G5BQ8NDX9 201 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 C8orf46Q8TAG6 207 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 RAB3CQ96E17 227 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 ETAA1Q9NY74 926 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 KIF25Q9UIL4 384 aa17.49■□□□□ 0.39
VPS29-206ENST00000549578 A0A075B6Q4 140 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 CD5LO43866 347 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 HPGDSO60760 199 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 GLAP06280 429 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 ERP29P30040 261 aaKnown RBP17.48■□□□□ 0.39
VPS29-206ENST00000549578 DVL1P1P54792 670 aaPredicted RBP17.48■□□□□ 0.39
VPS29-206ENST00000549578 DCAF12L2Q5VW00 463 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 OLFML2AQ68BL7 652 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 TMEM200BQ69YZ2 307 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 MZT2AQ6P582 158 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 PECRQ9BY49 303 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 ABCG5Q9H222 651 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 ZMAT3Q9HA38 289 aaKnown RBP17.48■□□□□ 0.39
VPS29-206ENST00000549578 HSF4Q9ULV5 492 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 INSIG2Q9Y5U4 225 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 DSCAML1Q8TD84 2053 aa17.48■□□□□ 0.39
VPS29-206ENST00000549578 KIR2DS1A0A191URI9 304 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 ODAMA1E959 279 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 LY6G6DO95868 133 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 EIF4EP06730 217 aaKnown RBP17.47■□□□□ 0.39
VPS29-206ENST00000549578 GNB3P16520 340 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 ZNF273Q14593 569 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 BTNL3Q6UXE8 466 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 TCF23Q7RTU1 214 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 DTX3Q8N9I9 347 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 KCNK7Q9Y2U2 307 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 MEIKINA0A087WXM9 373 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 A0A0G2JMP0 313 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 A0A0X1KG70 313 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 FUOMA2VDF0 154 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 PAX5Q02548 391 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 ZNF497Q6ZNH5 498 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 OR4M2Q8NGB6 313 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 PHF21AQ96BD5 680 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 BATF3Q9NR55 127 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 ONECUT1Q9UBC0 465 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 AK3Q9UIJ7 227 aa17.47■□□□□ 0.39
VPS29-206ENST00000549578 TRAV39A0A0B4J263 110 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 hADV38S2A0JD32 116 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 TMEM30CPA0ZSE6 113 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 CTDSP2O14595 271 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 SCGNO76038 276 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 LIPFP07098 398 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 HIST1H1DP16402 221 aaKnown RBP17.46■□□□□ 0.39
VPS29-206ENST00000549578 CCL3L1P16619 93 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 CDK2P24941 298 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 MEF2CQ06413 473 aaPredicted RBP17.46■□□□□ 0.39
VPS29-206ENST00000549578 SLC35E4Q6ICL7 350 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 FAHD2BQ6P2I3 314 aaPredicted RBP17.46■□□□□ 0.39
VPS29-206ENST00000549578 IZUMO1Q8IYV9 350 aa17.46■□□□□ 0.39
VPS29-206ENST00000549578 MCFD2Q8NI22 146 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms