RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 MEF2CQ06413 473 aaPredicted RBP13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 ARFRP1Q13795 201 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 GRK1Q15835 563 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 CARTPTQ16568 116 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 NEK7Q8TDX7 302 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 GPX8Q8TED1 209 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 NRGNQ92686 78 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 SEH1LQ96EE3 360 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 CMSS1Q9BQ75 279 aaKnown RBP13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 SULT4A1Q9BR01 284 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 SHARPINQ9H0F6 387 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 PCDHB10Q9UN67 800 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 NOTCH2Q04721 2471 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 PDZD2O15018 2839 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 A0A0G2JMP0 313 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 A0A0X1KG70 313 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 TMEM82A0PJX8 343 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 TMEM235A6NFC5 223 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 PSPNO60542 156 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 GNB3P16520 340 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 AMY2BP19961 511 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 P2RX3P56373 397 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 SCN1BQ07699 218 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF79Q15937 498 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 CD276Q5ZPR3 534 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 OR4M2Q8NGB6 313 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 OR5T2Q8NGG2 359 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 FCAMRQ8WWV6 532 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 CCL13Q99616 98 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 OCSTAMPQ9BR26 566 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 BPESC1Q9GZL8 116 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 SRRQ9GZT4 340 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 OR6C3Q9NZP0 311 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 SLC25A10Q9UBX3 287 aaPredicted RBP13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 RBMX2Q9Y388 322 aaKnown RBP13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.27
PRPF40A-212ENST00000545856 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
PRPF40A-212ENST00000545856 KIR2DS1A0A191URI9 304 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 A8MXK9 166 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 WNT2P09544 360 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 KIR2DS4P43632 304 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 KIR2DS1Q14954 304 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 TMEM30BQ3MIR4 351 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 C6orf183Q5T699 404 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 RSBN1Q5VWQ0 802 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 Q8N402 240 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 TMEM185AQ8NFB2 350 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 FAAP24Q9BTP7 215 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 PPA2Q9H2U2 334 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 PALMDQ9NP74 551 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 CLN8Q9UBY8 286 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ANAPC10Q9UM13 185 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.282e-8■■■■■ 64.5
PRPF40A-212ENST00000545856 A0A1W2PPH5 198 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ZNF205O95201 554 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 TBPP20226 339 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 RCVRNP35243 200 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 CEBPDP49716 269 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 AP3S2P59780 193 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 PYDC2Q56P42 97 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 AVPI1Q5T686 147 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ZNF880Q6PDB4 577 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 FAM216BQ8N7L0 139 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 ZNRF1Q8ND25 227 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 C19orf18Q8NEA5 215 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 OR4S1Q8NGB4 309 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 C8orf46Q8TAG6 207 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 MTFP1Q9UDX5 166 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 AK3Q9UIJ7 227 aa13.32□□□□□ -0.28
PRPF40A-212ENST00000545856 hADV38S2A0JD32 116 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 DVL1O14640 695 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 RBBP9O75884 186 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 GZMHP20718 246 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 CR1LQ2VPA4 569 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 ACTBL2Q562R1 376 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 Q5PR19 223 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 IZUMO1Q8IYV9 350 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 ZNF565Q8N9K5 539 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 CORO2AQ92828 525 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 LINC00312Q9Y6C7 94 aa13.31□□□□□ -0.28
PRPF40A-212ENST00000545856 ITPR3Q14573 2671 aa13.3□□□□□ -0.28
PRPF40A-212ENST00000545856 ODAMA1E959 279 aa13.3□□□□□ -0.28
PRPF40A-212ENST00000545856 UBE2QL1A1L167 161 aa13.3□□□□□ -0.28
PRPF40A-212ENST00000545856 FOXH1O75593 365 aa13.3□□□□□ -0.28
PRPF40A-212ENST00000545856 RBP4P02753 201 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms