RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 DUSP13Q9UII6 198 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 IGHV3OR15-7A0A075B7D8 119 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 A6NLC8 198 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 MPPED1O15442 326 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 SFTA3P0C7M3 94 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CD80P33681 288 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ZNF808Q8N4W9 903 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 RFESDQ8TAC1 157 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CNTNAP3BQ96NU0 1288 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CNTNAP3Q9BZ76 1288 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 PRDM14Q9GZV8 571 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 A0A1W2PPE3 182 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TM4SF5O14894 197 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 IAPPP10997 89 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CYCSP99999 105 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 IL15RAQ13261 267 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TBC1D28Q2M2D7 210 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 Q6ZR03 302 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 MKXQ8IYA7 352 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 C9orf106Q8NAJ2 232 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 LILRB1Q8NHL6 650 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 SPSB4Q96A44 273 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 MSI2Q96DH6 328 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 EIF5A2Q9GZV4 153 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 PPP1CCP36873 323 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 EWSR1Q01844 656 aaKnown RBP eCLIP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 PSG7Q13046 419 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DHRS11Q6UWP2 260 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ASCL4Q6XD76 172 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CPAMD8Q8IZJ3 1885 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 NUDT16L1Q9BRJ7 211 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 RHOFQ9HBH0 211 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ZNF724A8MTY0 619 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DNASE2O00115 360 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 NXPH2O95156 264 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TNFSF10P50591 281 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 HSD17B13Q7Z5P4 300 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DPPA2Q7Z7J5 298 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TGIF2LYQ8IUE0 185 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TAAR6Q96RI8 345 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 A0A1B0GW55 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L2P0CJ85 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L3P0CJ86 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L4P0CJ87 422 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L5P0CJ88 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L6P0CJ89 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L7P0CJ90 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 OR13C7P0DN81 318 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CTRB1P17538 263 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 FGF12P61328 243 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 AESQ08117 197 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 SWI5Q1ZZU3 235 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 UTF1Q5T230 341 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 CTRB2Q6GPI1 263 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4L9Q6RFH8 374 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 SELENOHQ8IZQ5 122 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 FAM58AQ8N1B3 248 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 AQP10Q96PS8 301 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 DUX4Q9UBX2 424 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TRAPPC2LQ9UL33 140 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 MEMO1Q9Y316 297 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 IGSF23A1L1A6 192 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 ATP6V1G2-DDX39BF2Z307 99 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 TXNL1O43396 289 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 UCP2P55851 309 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 BCL2L2Q92843 193 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 AKR1E2Q96JD6 320 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 SAV1Q9H4B6 383 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 Q9N2K0 584 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 NSG2Q9Y328 171 aa3.2□□□□□ -1.9
BRCA2-206ENST00000544455 MDC1Q14676 2089 aaKnown RBP3.2□□□□□ -1.9
BRCA2-206ENST00000544455 IGKV3D-15A0A087WSY6 115 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 DEGS1O15121 323 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 HMGB3O15347 200 aaKnown RBP3.19□□□□□ -1.9
BRCA2-206ENST00000544455 DNPH1O43598 174 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 TMEM50AO95807 157 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 HLA-GP17693 338 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 PMELP40967 661 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 PPT1P50897 306 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 EDDM3AQ14507 147 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 RIPPLY2Q5TAB7 128 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 LIAT1Q6ZQX7 453 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 VSIRQ9H7M9 311 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 CDH20Q9HBT6 801 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 M0R1B8 84 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 PSPNO60542 156 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 PGLYRP1O75594 196 aaPredicted RBP3.19□□□□□ -1.9
BRCA2-206ENST00000544455 DEFA4P12838 97 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 CCL20P78556 96 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 C22orf34Q6ZV56 151 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 ZCCHC24Q8N2G6 241 aaKnown RBP3.19□□□□□ -1.9
BRCA2-206ENST00000544455 ZNF610Q8N9Z0 462 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 MOB3AQ96BX8 217 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 HSF4Q9ULV5 492 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 ZNF883P0CG24 379 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 ERVFRD-1P60508 538 aa3.19□□□□□ -1.9
BRCA2-206ENST00000544455 LRP11Q86VZ4 500 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 372.9 ms