RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 IL15RAQ13261 267 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 Q6ZPA2 131 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 METTL8Q9H825 291 aaKnown RBP12.19□□□□□ -0.46
VPS33A-209ENST00000544349 ANXA10Q9UJ72 324 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 PCDHB10Q9UN67 800 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 ST3GAL6Q9Y274 331 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 IGF2RP11717 2491 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 NUPL2O15504 423 aaKnown RBP12.19□□□□□ -0.46
VPS33A-209ENST00000544349 LYL1P12980 280 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 ZNF83P51522 516 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 DAZAP2Q15038 168 aaPredicted RBP12.19□□□□□ -0.46
VPS33A-209ENST00000544349 PDCD1Q15116 288 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 PPA1Q15181 289 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 ZNF573Q86YE8 665 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 MKXQ8IYA7 352 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 BPIFCQ8NFQ6 507 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 OR10AD1Q8NGE0 317 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 SLAMF9Q96A28 289 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 SCGB3A2Q96PL1 93 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 TAS2R3Q9NYW6 316 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
VPS33A-209ENST00000544349 TSPAN4O14817 238 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 APOC3P02656 99 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 FCGR3AP08637 254 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 BCL3P20749 454 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 S100A10P60903 97 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 CYCSP99999 105 aaKnown RBP12.18□□□□□ -0.46
VPS33A-209ENST00000544349 SURF2Q15527 256 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-209ENST00000544349 C1orf174Q8IYL3 243 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 C2orf50Q96LR7 162 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 PRORYQ9H606 182 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 C14orf166Q9Y224 244 aaKnown RBP12.18□□□□□ -0.46
VPS33A-209ENST00000544349 ESPL1Q14674 2120 aa12.18□□□□□ -0.46
VPS33A-209ENST00000544349 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
VPS33A-209ENST00000544349 M0R1B8 84 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 SYNGR1O43759 233 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 RBM11P57052 281 aaKnown RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 RBM39Q14498 530 aaKnown RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 ALKBH2Q6NS38 261 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 HAGHLQ6PII5 290 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 FOXRED2Q8IWF2 684 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 ELOVL5Q9NYP7 299 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 JKAMPQ9P055 326 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 PURGQ9UJV8 347 aaKnown RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 FGF16O43320 207 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 IFNA2P01563 188 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 OR5H8P0DN80 308 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 TPT1P13693 172 aaKnown RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 ZNF718Q3SXZ3 478 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 CMSS1Q9BQ75 279 aaKnown RBP12.17□□□□□ -0.46
VPS33A-209ENST00000544349 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 RTL8AQ9BWD3 113 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 PKIBQ9C010 78 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 DNTTIP1Q9H147 329 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
VPS33A-209ENST00000544349 A0A1B0GW55 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 CRYM-AS1A6NIL9 109 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 TRAPPC2LH3BP13 241 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 KITLGP21583 273 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 AKR1C2P52895 323 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 FGF12P61328 243 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 IL24Q13007 206 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 ZNF273Q14593 569 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 FAM76BQ5HYJ3 339 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
VPS33A-209ENST00000544349 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 TOMM40LQ969M1 308 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
VPS33A-209ENST00000544349 AQP10Q96PS8 301 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
VPS33A-209ENST00000544349 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 CCKARP32238 428 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 FABP6P51161 128 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
VPS33A-209ENST00000544349 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 SLC22A25Q6T423 547 aa12.16□□□□□ -0.46
VPS33A-209ENST00000544349 WDR86Q86TI4 376 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms