RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.93
PCDH9-204ENST00000544246 TMEM255AQ5JRV8 349 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 ZNF738Q8NE65 137 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 PLA2G3Q9NZ20 509 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 STARD10Q9Y365 291 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 OR2W1Q9Y3N9 320 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 TRDCB7Z8K6 153 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 SHISA8B8ZZ34 492 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 CTAG2O75638 210 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 CIRBPQ14011 172 aaKnown RBP9.21□□□□□ -0.93
PCDH9-204ENST00000544246 PABPC1L2AQ5JQF8 200 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 FAM27D1Q5T7N8 215 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 C16orf82Q7Z2V1 217 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 EID2BQ96D98 161 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 C4orf45Q96LM5 186 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 KCNE3Q9Y6H6 103 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 CD3EP07766 207 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 LY75O60449 1722 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 KLK10O43240 276 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 HBZP02008 142 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-204ENST00000544246 SCAND1P57086 179 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.94
PCDH9-204ENST00000544246 CDX2Q99626 313 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-204ENST00000544246 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 TNRC6CQ9HCJ0 1690 aaKnown RBP9.21□□□□□ -0.94
PCDH9-204ENST00000544246 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 GPR3P46089 330 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
PCDH9-204ENST00000544246 SLC35E3Q7Z769 313 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 WFDC5Q8TCV5 224 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 FAM222BQ8WU58 562 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.94
PCDH9-204ENST00000544246 OR2W5A6NFC9 320 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 IGHV3-13P01766 116 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 IGHV3-7P01780 117 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 RAB9AP51151 201 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF880Q6PDB4 577 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 BHLHA15Q7RTS1 189 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF441Q8N8Z8 693 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 PHF7Q9BWX1 381 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-204ENST00000544246 UBTD1Q9HAC8 227 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 SOX21Q9Y651 276 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-204ENST00000544246 SCN4AP35499 1836 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 TMEM183AQ8IXX5 376 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 SLC25A40Q8TBP6 338 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 HIST1H4GQ99525 98 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 HMSDA8MTL9 139 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 PPP1R17O96001 155 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 MT-CO3P00414 261 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 LRRC75BQ2VPJ9 315 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 WDR13Q9H1Z4 485 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 PAGE4O60829 102 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 SS18L1O75177 396 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-204ENST00000544246 ABLIM3O94929 683 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 KLKB1P03952 638 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 C12orf73Q69YU5 71 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 LDLRAD3Q86YD5 345 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 TMPRSS2O15393 492 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 RBFOX2O43251 390 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF32P17041 273 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 GFERP55789 205 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 MPV17LQ2QL34 196 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 LHX8Q68G74 356 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 HEXA-AS1Q9H8Q6 139 aa9.2□□□□□ -0.94
PCDH9-204ENST00000544246 A0A0A6YYD5 115 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ECSCRQ19T08 205 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 BEND2Q8NDZ0 799 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 GPR27Q9NS67 375 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SIRT5Q9NXA8 310 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 TMIGD3P0DMS9 266 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-204ENST00000544246 MYH8P13535 1937 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 WNT5AP41221 380 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SMAD4Q13485 552 aaKnown RBP9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SPATA45Q537H7 98 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SLC23A3Q6PIS1 610 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 PRDM14Q9GZV8 571 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 MPC1Q9Y5U8 109 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 RAG2P55895 527 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF117Q03924 483 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ISOC2Q96AB3 205 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ASB16Q96NS5 453 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 P2RX4Q99571 388 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 SBF2Q86WG5 1849 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 ZNF735P0CB33 412 aa9.19□□□□□ -0.94
PCDH9-204ENST00000544246 LOXL3P58215 753 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms