RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GPR61Q9BZJ8 451 aa13.64□□□□□ -0.23
CHD4-210ENST00000544040 DIRC3C9JPN6 131 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 CA2P00918 260 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 LDLRAD3Q86YD5 345 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 C9orf62Q8N4C0 152 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 AGFG2O95081 481 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 PRR35P0CG20 571 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
CHD4-210ENST00000544040 SLC35B1P78383 322 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 EWSR1Q01844 656 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHD4-210ENST00000544040 FOXO1Q12778 655 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 PRNTQ86SH4 94 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 OR4D9Q8NGE8 314 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 RAG2P55895 527 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 LYPD8Q6UX82 237 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 V9GYH0 126 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 PMELP40967 661 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 CLDN18P56856 261 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 CD226Q15762 336 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 SLC25A30Q5SVS4 291 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 CRYABP02511 175 aaKnown RBP13.63□□□□□ -0.23
CHD4-210ENST00000544040 CT62P0C5K7 136 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 GPR3P46089 330 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 SLC23A3Q6PIS1 610 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 CBLN3Q6UW01 205 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 ZNF502Q8TBZ5 544 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 ASB10Q8WXI3 467 aa13.63□□□□□ -0.23
CHD4-210ENST00000544040 NKX2-6A6NCS4 301 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 MFSD2BA6NFX1 497 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 CRHP06850 196 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SRFP11831 508 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 RTP5Q14D33 572 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 PET117Q6UWS5 81 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 EAF1Q96JC9 268 aaPredicted RBP13.62□□□□□ -0.23
CHD4-210ENST00000544040 RASL11BQ9BPW5 248 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 FRRS1LQ9P0K9 344 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 ANXA10Q9UJ72 324 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SMIM6P0DI80 62 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 GALP22466 123 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 LGALSLQ3ZCW2 172 aaPredicted RBP13.62□□□□□ -0.23
CHD4-210ENST00000544040 LYZL2Q7Z4W2 148 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 MRGPRFQ96AM1 343 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 RAB37Q96AX2 223 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SLC35E3Q7Z769 313 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 RCC1P18754 421 aaPredicted RBP13.62□□□□□ -0.23
CHD4-210ENST00000544040 MRPL58Q14197 206 aaKnown RBP13.62□□□□□ -0.23
CHD4-210ENST00000544040 ADIPOQQ15848 244 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SPINK14Q6IE38 97 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 IGHV3OR15-7A0A075B7D8 119 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SIGLEC5O15389 551 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 HAND1O96004 215 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 MMP9P14780 707 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 PNLIPP16233 465 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 SIGLEC14Q08ET2 396 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 TWIST1Q15672 202 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 OR2J1Q9GZK6 312 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 NEU3Q9UQ49 428 aa13.62□□□□□ -0.23
CHD4-210ENST00000544040 OR5R1Q8NH85 324 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
CHD4-210ENST00000544040 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 KLF7O75840 302 aaPredicted RBP13.61□□□□□ -0.23
CHD4-210ENST00000544040 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
CHD4-210ENST00000544040 R4GN57 208 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 OOEPA6NGQ2 149 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 LMO7DNF2Z398 122 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 GABRG2P18507 467 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 GABRG3Q99928 467 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 SERGEFQ9UGK8 458 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 LINC01555Q8NAE3 123 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 RPS4Y2Q8TD47 263 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 LILRA5A6NI73 299 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 FAHD2AQ96GK7 314 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
CHD4-210ENST00000544040 KCNE1BA0A087WTH5 132 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 DHRS7CA6NNS2 312 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 CD82P27701 267 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 CHD4Q14839 1912 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 KDM3BQ7LBC6 1761 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 CEACAM3P40198 252 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 ACER2Q5QJU3 275 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 TMEM108Q6UXF1 575 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 RCC2Q9P258 522 aaKnown RBP13.6□□□□□ -0.23
CHD4-210ENST00000544040 C5P01031 1676 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 B4DEV8 164 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 PDE6DO43924 150 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 MESTQ5EB52 335 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 TP53I13Q8NBR0 393 aaPredicted RBP13.6□□□□□ -0.23
CHD4-210ENST00000544040 ISLRO14498 428 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
CHD4-210ENST00000544040 BTF3P20290 206 aaKnown RBP13.6□□□□□ -0.23
CHD4-210ENST00000544040 RAB24Q969Q5 203 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 PTX4Q96A99 478 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 NRTNQ99748 197 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms