RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 GABRB1P18505 474 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 NFYBP25208 207 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 GLP1RP43220 463 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 OR3A4PP47883 348 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 IL13RA2Q14627 380 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 CDK5R1Q15078 307 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 RSU1Q15404 277 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 TMEM95Q3KNT9 176 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 CCDC58Q4VC31 144 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 GPR148Q8TDV2 347 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 TNFAIP8L1Q8WVP5 186 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 SGCDQ92629 289 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 TOMM40LQ969M1 308 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 RPEQ96AT9 228 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 COQ2Q96H96 371 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 PDCD1LG2Q9BQ51 273 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 ING3Q9NXR8 418 aa10.5□□□□□ -0.73
RTN3-213ENST00000543552 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
RTN3-213ENST00000543552 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 ADARB2-AS1A8MUL3 147 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 HSPB6O14558 160 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 PF4P02776 101 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 CD33P20138 364 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 CD24P25063 80 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 PPP3R1P63098 170 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 CD83Q01151 205 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 PAX5Q02548 391 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 ABCA11PQ4W5N1 156 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 LPCAT4Q643R3 524 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 TMPRSS11AQ6ZMR5 421 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 Q6ZS46 218 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 SATL1Q86VE3 508 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 ZNF555Q8NEP9 628 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 OR10A7Q8NGE5 316 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 OR52I1Q8NGK6 324 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 CNIH3Q8TBE1 160 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 KIRREL1Q96J84 757 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 NR1H4Q96RI1 486 aaPredicted RBP10.49□□□□□ -0.73
RTN3-213ENST00000543552 S100A13Q99584 98 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 JAM3Q9BX67 310 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 PPIL3Q9H2H8 161 aaKnown RBP10.49□□□□□ -0.73
RTN3-213ENST00000543552 AMBNQ9NP70 447 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 MRPS18AQ9NVS2 196 aaKnown RBP10.49□□□□□ -0.73
RTN3-213ENST00000543552 PAK1IP1Q9NWT1 392 aaPredicted RBP10.49□□□□□ -0.73
RTN3-213ENST00000543552 CALYQ9NYX4 217 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 HSPE1-MOB4S4R3N1 261 aa10.49□□□□□ -0.73
RTN3-213ENST00000543552 KIAA2026Q5HYC2 2103 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 E9PI62 339 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 GABRPO00591 440 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 IL1AP01583 271 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 LPLP06858 475 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 RAB7AP51149 207 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 MADCAM1Q13477 382 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 MED21Q13503 144 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 ZSCAN26Q16670 478 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 C17orf58Q2M2W7 97 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 OXLD1Q5BKU9 147 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 ZNF529Q6P280 563 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 RPL22L1Q6P5R6 122 aaKnown RBP10.48□□□□□ -0.73
RTN3-213ENST00000543552 BAIAP2L2Q6UXY1 529 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 SLC16A12Q6ZSM3 486 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 PQLC1Q8N2U9 271 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 RDH12Q96NR8 316 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 FAM118AQ9NWS6 357 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 AASSQ9UDR5 926 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
RTN3-213ENST00000543552 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 J3QR06 171 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 DUS4LO95620 317 aaKnown RBP10.47□□□□□ -0.73
RTN3-213ENST00000543552 CSTBP04080 98 aaKnown RBP10.47□□□□□ -0.73
RTN3-213ENST00000543552 MYL12AP19105 171 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 DCKP27707 260 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 GDNFP39905 211 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 SOX2P48431 317 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 SLC35A2P78381 396 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 KHDC1LQ5JSQ8 128 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 C9orf152Q5JTZ5 239 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 Q6ZPA2 131 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 RNF144BQ7Z419 303 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 LINC00596Q86U02 117 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 OR8H3Q8N146 312 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 OR10X1Q8NGY0 326 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 TMEM106AQ96A25 262 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 PHF21AQ96BD5 680 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 ZNF649Q9BS31 505 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 METTL9Q9H1A3 318 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 S100A14Q9HCY8 104 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 FGF20Q9NP95 211 aaPredicted RBP10.47□□□□□ -0.73
RTN3-213ENST00000543552 TMEM138Q9NPI0 162 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 TAS2R4Q9NYW5 299 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms