RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SPNS3Q6ZMD2 512 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4C5Q8NGB2 326 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF486Q96H40 463 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CISD1Q9NZ45 108 aaKnown RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TTC28Q96AY4 2481 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 IGHA2P01877 340 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 LIMS3P0CW19 117 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 LIMS4P0CW20 117 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 BTG1P62324 171 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PCOLCEQ15113 449 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF239Q16600 458 aaKnown RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC25A30Q5SVS4 291 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 SAMD13Q5VXD3 122 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PPP1R32Q7Z5V6 425 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TEX29Q8N6K0 151 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OR52N4Q8NGI2 321 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 SFT2D1Q8WV19 159 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 FAAP24Q9BTP7 215 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PSENENQ9NZ42 101 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 KCNMB2Q9Y691 235 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 MYO16Q9Y6X6 1858 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1B0GWJ7 208 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CLEC18AA5D8T8 446 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PDE6DO43924 150 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 UPK3AO75631 287 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TIAF1O95411 115 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 NTN1O95631 604 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF224P0DH78 156 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CD276Q5ZPR3 534 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 NCR3LG1Q68D85 454 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 C6orf201Q7Z4U5 140 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 ZFP62Q8NB50 900 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 CLEC18CQ8NCF0 446 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 C10orf35Q96D05 121 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 GNPNAT1Q96EK6 184 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 DIRC2Q96SL1 478 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2J1Q9GZK6 312 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 BARX1Q9HBU1 254 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC17A5Q9NRA2 495 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC7A10Q9NS82 523 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PPIAL4EA0A075B759 164 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PPIAL4DF5H284 164 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 K7ESF4 209 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TRAF3IP2O43734 574 aaPredicted RBP6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PPIAL4FP0DN26 164 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 MFSD4AQ8N468 514 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 TMPRSS13Q9BYE2 586 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 MAGT1Q9H0U3 335 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 AUNIPQ9H7T9 357 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 PPIAL4AQ9Y536 164 aa6.05□□□□□ -1.44
SRGAP1-206ENST00000543397 C20orf202A1L168 122 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF98A6NK75 572 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 K7ERU9 68 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 DVL1O14640 695 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 IGHV3-13P01766 116 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 IGHV3-7P01780 117 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SULT1A3P0DMM9 295 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SULT1A4P0DMN0 295 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 S100A11P31949 105 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 DVL1P1P54792 670 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 UQCC3Q6UW78 93 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SMIM4Q8WVI0 70 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ADTRPQ96IZ2 230 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 CTDSP1Q9GZU7 261 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 CHRNA10Q9GZZ6 450 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SEBOXQ9HB31 216 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR1A1Q9P1Q5 309 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 PUS1Q9Y606 427 aaKnown RBP eCLIP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 V9GYY9 64 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ELOA3CA0A087WX78 387 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 C1orf196B1AJZ1 125 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 TGFBR3LH3BV60 316 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 COX7A2P2O60397 106 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 IGKV1D-16P01601 117 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SEMG1P04279 462 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 GZMHP20718 246 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 MRPS11P82912 194 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SOHLH1Q5JUK2 328 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4D11Q8NGI4 311 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR13D1Q8NGV5 346 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 VSTM2AQ8TAG5 236 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SFXN3Q9BWM7 321 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2D2Q9H210 308 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 PURGQ9UJV8 347 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF115Q9Y4L5 304 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 CSAG2Q9Y5P2 127 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 TRBV5-3A0A0A0MS03 114 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1W2PN81 502 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ERVH48-1M5A8F1 160 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 HAND1O96004 215 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 RBP4P02753 201 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 S100A8P05109 93 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 CHRNA7P36544 502 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR10W1Q8NGF6 305 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4C16Q8NGL9 310 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ABHD17AQ96GS6 310 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 PCGF1Q9BSM1 259 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 TAF9BQ9HBM6 251 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 KLK11Q9UBX7 282 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms