RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SMDT1Q9H4I9 107 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 CCL28Q9NRJ3 127 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 PDE6DO43924 150 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 TMEM65Q6PI78 240 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 SPNS3Q6ZMD2 512 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 F5P12259 2224 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 M0R2Z0 102 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 CA11O75493 328 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 LYZL6O75951 148 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 FAM87AP0C7U9 286 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 NAT1P18440 290 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 BCL3P20749 454 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 HFEQ30201 348 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 TMEM108Q6UXF1 575 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 CHST5Q9GZS9 411 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 PMELP40967 661 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 Q6ZN92 141 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 HSD17B10Q99714 261 aaKnown RBP11.53□□□□□ -0.56
TNC-212ENST00000542877 NPAS1Q99742 590 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 SLC26A1Q9H2B4 701 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 PCOLCE2Q9UKZ9 415 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
TNC-212ENST00000542877 PGA4P0DJD7 388 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 PGA5P0DJD9 388 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 LYRM7Q5U5X0 104 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.56
TNC-212ENST00000542877 SNX22Q96L94 193 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 NRTNQ99748 197 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 DOK5Q9P104 306 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 MYO7AQ13402 2215 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 GLI3P10071 1580 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 ZNF260Q3ZCT1 412 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 LINC00596Q86U02 117 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 VSIG4Q9Y279 399 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 OR2W1Q9Y3N9 320 aa11.52□□□□□ -0.56
TNC-212ENST00000542877 NHSL1Q5SYE7 1610 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 TTRP02766 147 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 GZMHP20718 246 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 EFNB2P52799 333 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 VWA1Q6PCB0 445 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
TNC-212ENST00000542877 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 PTPMT1Q8WUK0 201 aaPredicted RBP11.52□□□□□ -0.57
TNC-212ENST00000542877 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 HAND1O96004 215 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 ORM2P19652 201 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 CEACAM3P40198 252 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
TNC-212ENST00000542877 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
TNC-212ENST00000542877 TGIF2LXQ8IUE1 241 aa11.52□□□□□ -0.57
TNC-212ENST00000542877 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
TNC-212ENST00000542877 MEX3AA1L020 520 aaKnown RBP11.51□□□□□ -0.57
TNC-212ENST00000542877 J3QT63 122 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
TNC-212ENST00000542877 GHITMQ9H3K2 345 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 K7EQS6 105 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 HRKO00198 91 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 K7ESF4 209 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 DEDDO75618 318 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 ACAA2P42765 397 aaKnown RBP11.51□□□□□ -0.57
TNC-212ENST00000542877 PSG5Q15238 335 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 KHDC3LQ587J8 217 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 RAB24Q969Q5 203 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 GOSR1O95249 250 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR10J1P30954 320 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 PRSS12P56730 875 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 HIST3H3Q16695 136 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OVCH2Q7RTZ1 564 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR5A2Q8NGI9 324 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 OR4P4Q8NGL7 312 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 CCL17Q92583 94 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 LHX9Q9NQ69 397 aa11.51□□□□□ -0.57
TNC-212ENST00000542877 DNPH1O43598 174 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 LYZP61626 148 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 SH2D7A6NKC9 451 aaPredicted RBP11.5□□□□□ -0.57
TNC-212ENST00000542877 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
TNC-212ENST00000542877 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 SIRT4Q9Y6E7 314 aaPredicted RBP11.5□□□□□ -0.57
TNC-212ENST00000542877 TMEM50BP56557 158 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 OR1B1Q8NGR6 318 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 LPAR5Q9H1C0 372 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 SRD5A3Q9H8P0 318 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms