RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 DNAJC9Q8WXX5 260 aa13.96□□□□□ -0.17
CLSTN3-214ENST00000542663 NSL1Q96IY1 281 aa13.96□□□□□ -0.17
CLSTN3-214ENST00000542663 PSG11Q9UQ72 335 aa13.96□□□□□ -0.17
CLSTN3-214ENST00000542663 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 SULT1C4O75897 302 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 APOL3O95236 402 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 CDX1P47902 265 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 ISL1P61371 349 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 CDK5R1Q15078 307 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 PNLIPRP3Q17RR3 467 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 C12orf73Q69YU5 71 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 RNF152Q8N8N0 203 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 OR13A1Q8NGR1 328 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 OPALINQ96PE5 141 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 SPACA5Q96QH8 159 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 ZNF256Q9Y2P7 627 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-214ENST00000542663 STARD9Q9P2P6 4700 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 AP4M1O00189 453 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 UBCP0CG48 685 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 T-ENOLP0DO92 83 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 PRKACBP22694 351 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 RAB7AP51149 207 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 MADCAM1Q13477 382 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 FHL3Q13643 280 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 EBI3Q14213 229 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 GID4Q8IVV7 300 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 OR8H3Q8N146 312 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 CHST4Q8NCG5 386 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 Q8NFD4 153 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 OR51T1Q8NGJ9 327 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 OR5D18Q8NGL1 313 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 FGGYQ96C11 551 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 OSBPL10Q9BXB5 764 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 PRRG3Q9BZD7 231 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 LINC00574Q9H8X3 128 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
CLSTN3-214ENST00000542663 ZAR1LA6NP61 321 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 MITFO75030 526 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 FKBP6O75344 327 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 OR2T7P0C7T2 308 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 GLP1RP43220 463 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 GPR12P47775 334 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 FOXE3Q13461 319 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 GPR50Q13585 617 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 CXorf66Q5JRM2 361 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 SBSPONQ8IVN8 264 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 SPSB1Q96BD6 273 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 NRBF2Q96F24 287 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 IDI2-AS1Q9NZ38 188 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 KIF25Q9UIL4 384 aa13.93□□□□□ -0.18
CLSTN3-214ENST00000542663 LCE6AA0A183 80 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 NPIPB11E5RHQ5 1161 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 CCRL2O00421 344 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 HOXB6P17509 224 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 GNG10P50151 68 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 CFHR3Q02985 330 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 BNIP1Q12981 228 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 ZNF260Q3ZCT1 412 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 TP53I3Q53FA7 332 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 TGIF2LXQ8IUE1 241 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 Q8N6K4 173 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 Q8N9W7 124 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 HAVCR2Q8TDQ0 301 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 MBOAT4Q96T53 435 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 LIN7CQ9NUP9 197 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 WARS2Q9UGM6 360 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 SMAD5-AS1Q9Y6J3 95 aa13.92□□□□□ -0.18
CLSTN3-214ENST00000542663 A0A1W2PPE3 182 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 HSPB6O14558 160 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 DEGS1O15121 323 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 IL1AP01583 271 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 ELANEP08246 267 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 CALB2P22676 271 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 ZNF85Q03923 595 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 ZNF816Q0VGE8 651 aaPredicted RBP13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 LTC4SQ16873 150 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 TMEM244Q5VVB8 128 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 SAXO1Q8IYX7 474 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 ZNF565Q8N9K5 539 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 OR10H4Q8NGA5 316 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 OR2G2Q8NGZ5 317 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 OR10AC1Q8NH08 325 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 C4orf3Q8WVX3 66 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 GNG8Q9UK08 70 aa13.91□□□□□ -0.18
CLSTN3-214ENST00000542663 MEIKINA0A087WXM9 373 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 IGHV3-72A0A0B4J1Y9 119 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 IGHV1-3A0A0C4DH29 117 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 H0YJX3 145 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 HSD17B6O14756 317 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 MT-ND2P03891 347 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 ISG15P05161 165 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms