RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SPATA46Q5T0L3 261 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 LEG1Q6P5S2 330 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 DNM1P46Q6ZS02 220 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 ZNF584Q8IVC4 421 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 CMTM1Q8IZ96 169 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 CCDC71LQ8N9Z2 235 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 OR10G3Q8NGC4 313 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 OR1J1Q8NGS3 322 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 OR4S2Q8NH73 311 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 GPX8Q8TED1 209 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 BCL2L2Q92843 193 aaPredicted RBP6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 RNF166Q96A37 237 aaPredicted RBP6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 RASL10BQ96S79 203 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 S100A13Q99584 98 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 ACTR3CQ9C0K3 210 aaPredicted RBP6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 TUBA4BQ9H853 241 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 STRAPQ9Y3F4 350 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 MPDZO75970 2070 aa6.96□□□□□ -1.29
PDLIM5-221ENST00000542407 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 A0A1W2PNU3 283 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF705GA8MUZ8 300 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 A8MVM7 634 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 CDIPTO14735 213 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 NUDT14O95848 222 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 IGHMP01871 453 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SGCBQ16585 318 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 MIDNQ504T8 468 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC25A53Q5H9E4 307 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF684Q5T5D7 378 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 C1orf140Q5VVS0 124 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF343Q6P1L6 599 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 BTNL8Q6UX41 500 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF610Q8N9Z0 462 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OR13C9Q8NGT0 318 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OR2Y1Q8NGV0 311 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OR51F2Q8NH61 342 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF519Q8TB69 540 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 HPSE2Q8WWQ2 592 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ST8SIA1Q92185 356 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 HARBI1Q96MB7 349 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SPRY4Q9C004 299 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OR11A1Q9GZK7 315 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 KCNJ16Q9NPI9 418 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 FRRS1LQ9P0K9 344 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 PTRH2Q9Y3E5 179 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 CHCHD2Q9Y6H1 151 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 FAM157AC9JC47 383 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 EFNA2O43921 213 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 GPANK1O95872 356 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 TFPI2P48307 235 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SRSF4Q08170 494 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SPOCK1Q08629 439 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OTPQ5XKR4 325 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 RTN4RL2Q86UN3 420 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC25A42Q86VD7 318 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 FAM58AQ8N1B3 248 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 TMEM229BQ8NBD8 167 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 C1orf162Q8NEQ5 155 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 RPS4Y2Q8TD47 263 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 PPP1R14AQ96A00 147 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 TMEM186Q96B77 213 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 TSSK2Q96PF2 358 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 OR2J1Q9GZK6 312 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 MRPL22Q9NWU5 206 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC22A13Q9Y226 551 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 LOXL2Q9Y4K0 774 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 R4GN57 208 aa6.96□□□□□ -1.3
PDLIM5-221ENST00000542407 ALPK2Q86TB3 2170 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 TMEM269A0A1B0GVZ9 245 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 GJE1A6NN92 205 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF724A8MTY0 619 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 GNG7O60262 68 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 SCGNO76038 276 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 STK17BO94768 372 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 CLDN6P56747 220 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 RPS23P62266 143 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 FOXF1Q12946 379 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 MEP1BQ16820 701 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 PLCXD3Q63HM9 321 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 OR2T2Q6IF00 324 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 HEPN1Q6WQI6 88 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 GVQW1Q8N7I0 195 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 CHST4Q8NCG5 386 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 REEP6Q96HR9 211 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 ALG12Q9BV10 488 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 SH2D2AQ9NP31 389 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 B3GAT1Q9P2W7 334 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 HSPB7Q9UBY9 170 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 TUBD1Q9UJT1 453 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 RAB22AQ9UL26 194 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 A0A087WZY1 265 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 H7C1C5 153 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 PLPP3O14495 311 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 CNIH1O95406 144 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 TOMM40O96008 361 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 PI3P19957 117 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 LCN6P62502 163 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms