RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SEC31AO94979 1220 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRBV12-3P01733 135 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 HLA-DRB1P01911 266 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 BCHEP06276 602 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CHRNGP07510 517 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 H2BFMP0C1H6 154 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CCDC175P0C221 793 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC2A2P11168 524 aaPredicted RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 BGNP21810 368 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 ALDH3A1P30838 453 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 PRDX2P32119 198 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 TNFSF8P32971 234 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 MAGEA2P43356 314 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 ALDH3B2P48448 385 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CLNS1AP54105 237 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 F2RL1P55085 397 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 DAD1P61803 113 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CSNK2BP67870 215 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SRSF9Q13242 221 aaKnown RBP eCLIP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 PIN1Q13526 163 aaPredicted RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 GNA13Q14344 377 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 LINC01620Q4KN68 170 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 AKIRIN2Q53H80 203 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 C10orf128Q5T292 105 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM222AQ5U5X8 452 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 LAMTOR1Q6IAA8 161 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 TYW3Q6IPR3 259 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 TNFAIP8L2Q6P589 184 aaPredicted RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 HAGHLQ6PII5 290 aaPredicted RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SPINK6Q6UWN8 80 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 BTNL8Q6UX41 500 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 PLEKHG7Q6ZR37 379 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CCDC91Q7Z6B0 441 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 HSCBQ8IWL3 235 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF440Q8IYI8 595 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 YIPF7Q8N8F6 280 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 LRTM2Q8N967 370 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR1F12Q8NHA8 337 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC35G2Q8TBE7 412 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 FBXO25Q8TCJ0 367 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 CNOT9Q92600 299 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC38A4Q969I6 547 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 MARC2Q969Z3 335 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 ATP6V1E2Q96A05 226 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM120BQ96EK7 910 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC41A3Q96GZ6 507 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 C7orf26Q96N11 449 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 IFT27Q9BW83 186 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 HINT2Q9BX68 163 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM120AQ9BXJ8 343 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 DPY30Q9C005 99 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 C5orf66Q9H5L9 145 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZCCHC3Q9NUD5 404 aaKnown RBP1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM118AQ9NWS6 357 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 BABAM2Q9NXR7 383 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 VPS29Q9UBQ0 182 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 NUBP2Q9Y5Y2 271 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 LINC00312Q9Y6C7 94 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 KCNE3Q9Y6H6 103 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 A3GALT2U3KPV4 340 aa1.34□□□□□ -2.19
TRAV1-1-201ENST00000542354 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRAV36DV7A0A075B6V5 113 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRBV5-7A0A0A0MS05 114 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGHV3-72A0A0B4J1Y9 119 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF320A2RRD8 509 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR6C6A6NF89 314 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 RBFOX3A6NFN3 312 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 SMIM9A6NGZ8 99 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANKRD30BLA7E2S9 258 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 C11orf98E9PRG8 122 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 H3BUA1 57 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF593O00488 134 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ISLRO14498 428 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 MTRF1O75570 445 aaKnown RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 MMP23AO75900 390 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 WISP3O95389 354 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GAPDHP04406 335 aaKnown RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 TPM2P07951 284 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GUSBP08236 651 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANXA4P09525 319 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 H2AFZP0C0S5 128 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZSCAN5DPP0CG00 497 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ADORA3P0DMS8 318 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 NR2C1P13056 603 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GNB3P16520 340 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 EDN2P20800 178 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 MSR1P21757 451 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CDK2P24941 298 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CD1BP29016 333 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CCT5P48643 541 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF133P52736 654 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CACNG7P62955 275 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ARL16Q0P5N6 197 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZKSCAN8Q15776 578 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 LRRC36Q1X8D7 754 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ASB16-AS1Q495Z4 193 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM106AQ4KMX7 169 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ELP2Q6IA86 826 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR4A47Q6IF82 309 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms