RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 E9PQ18 207 aa14□□□□□ -0.17
VARS2-212ENST00000542001 M0R1B8 84 aa14□□□□□ -0.17
VARS2-212ENST00000542001 ISG15P05161 165 aa14□□□□□ -0.17
VARS2-212ENST00000542001 OR4A16Q8NH70 328 aa14□□□□□ -0.17
VARS2-212ENST00000542001 SNIP1Q8TAD8 396 aaKnown RBP14□□□□□ -0.17
VARS2-212ENST00000542001 AQP7O14520 342 aa14□□□□□ -0.17
VARS2-212ENST00000542001 SYNGR1O43759 233 aa14□□□□□ -0.17
VARS2-212ENST00000542001 HEXAP06865 529 aa14□□□□□ -0.17
VARS2-212ENST00000542001 SOX8P57073 446 aa14□□□□□ -0.17
VARS2-212ENST00000542001 ZNF787Q6DD87 383 aa14□□□□□ -0.17
VARS2-212ENST00000542001 B3GAT1Q9P2W7 334 aa14□□□□□ -0.17
VARS2-212ENST00000542001 A0A1B0GTI1 187 aa14□□□□□ -0.17
VARS2-212ENST00000542001 A0A1W2PPE2 198 aa14□□□□□ -0.17
VARS2-212ENST00000542001 GABRA4P48169 554 aa14□□□□□ -0.17
VARS2-212ENST00000542001 ZNF83P51522 516 aa14□□□□□ -0.17
VARS2-212ENST00000542001 FLI1Q01543 452 aaPredicted RBP14□□□□□ -0.17
VARS2-212ENST00000542001 ZNF766Q5HY98 468 aa14□□□□□ -0.17
VARS2-212ENST00000542001 CXorf66Q5JRM2 361 aaPredicted RBP14□□□□□ -0.17
VARS2-212ENST00000542001 OR2Z1Q8NG97 314 aa14□□□□□ -0.17
VARS2-212ENST00000542001 MRPS24Q96EL2 167 aaKnown RBP14□□□□□ -0.17
VARS2-212ENST00000542001 TVP23CQ96ET8 276 aa14□□□□□ -0.17
VARS2-212ENST00000542001 ARV1Q9H2C2 271 aa14□□□□□ -0.17
VARS2-212ENST00000542001 MPPED1O15442 326 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 ENSAO43768 121 aaKnown RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 CTSDP07339 412 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 FCGR3AP08637 254 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 SNCAP37840 140 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 HOXA1P49639 335 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 S100A12P80511 92 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 FAM27BQ5VT28 67 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 MRGPRFQ96AM1 343 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 AURKAIP1Q9NWT8 199 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 TRAV14DV4A0A0A6YYC5 116 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 SPAARA0A1B0GVQ0 90 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 TMEM14DPA8MWL7 114 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 CYB5BO43169 146 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 NPIPB7O75200 414 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 DYNLT3P51808 116 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 BATFQ16520 125 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 OR4F5Q8NH21 305 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 OR4F4Q96R69 305 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 HEXA-AS1Q9H8Q6 139 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 ZNF705FA8MVS1 300 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 ZNF705DP0CH99 300 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 ZNF705BP0CI00 300 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 AWAT1Q58HT5 328 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 PAQR4Q8N4S7 273 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 SLX1AQ9BQ83 275 aa13.99□□□□□ -0.17
VARS2-212ENST00000542001 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
VARS2-212ENST00000542001 SHOXO15266 292 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
VARS2-212ENST00000542001 ZNF273Q14593 569 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 LIAT1Q6ZQX7 453 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 NMES1Q9C002 83 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 PSG11Q9UQ72 335 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 POLDIP2Q9Y2S7 368 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 FREM1Q5H8C1 2179 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 IGKV1-9A0A0C4DH69 117 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 SPINT2O43291 252 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 CRYBA1P05813 215 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 MPV17LQ2QL34 196 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 LHFPL5Q8TAF8 219 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 OR2J1Q9GZK6 312 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 SLC26A1Q9H2B4 701 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 IL36RNQ9UBH0 155 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 COX6A1P12074 109 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 SUCLG1P53597 346 aaKnown RBP13.98□□□□□ -0.17
VARS2-212ENST00000542001 SSX2Q16385 188 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 ZNF826PQ6ZT77 177 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 OR52M1Q8NGK5 317 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 TMEM9BQ9NQ34 198 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 WSB1Q9Y6I7 421 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 PLXNA4Q9HCM2 1894 aa13.98□□□□□ -0.17
VARS2-212ENST00000542001 DFFBO76075 338 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 HBE1P02100 147 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 CLPSP04118 112 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 LPAR6P43657 344 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 LY6G6FQ5SQ64 297 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 NCMAPQ5T1S8 102 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 FDX2Q6P4F2 183 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 SCCPDHQ8NBX0 429 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 IFT22Q9H7X7 185 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 SLC25A22Q9H936 323 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 PRSS50Q9UI38 385 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 IGKV1D-8A0A087WSZ0 117 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 PMS2P1A4D2B8 440 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 DCAF10Q5QP82 559 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 M1APQ8TC57 530 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 ZNF391Q9UJN7 358 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 PLCE1Q9P212 2302 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 A0A1W2PPQ1 181 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 CTXN2P0C2S0 81 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 FAHD2BQ6P2I3 314 aaPredicted RBP13.97□□□□□ -0.17
VARS2-212ENST00000542001 NFAM1Q8NET5 270 aaPredicted RBP13.97□□□□□ -0.17
VARS2-212ENST00000542001 OR2M7Q8NG81 312 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 FAHD2AQ96GK7 314 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
VARS2-212ENST00000542001 TGIF2Q9GZN2 237 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms