RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 POLEQ07864 2286 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF850A8MQ14 1090 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 H0YL77 283 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 HKR1P10072 659 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 APLNRP35414 380 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 ZP4Q12836 540 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 PCK2Q16822 640 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 FER1L6-AS2Q96M78 137 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 ROS1P08922 2347 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 TRAF3IP2O43734 574 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF17P17021 662 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 CD82P27701 267 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 MAGEA5P43359 124 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 SRYQ05066 204 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 OR2T2Q6IF00 324 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 BEND4Q6ZU67 534 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 OIT3Q8WWZ8 545 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 RTBDNQ9BSG5 229 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 IGHEP01854 428 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 CSNK1A1P48729 337 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 TAS2R60P59551 318 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 OPN5Q6U736 354 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 TMEM182Q6ZP80 229 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF385AQ96PM9 386 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BKO60814 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HPNP05981 417 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BJP06899 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 GSTP1P09211 210 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 MMP7P09237 267 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 OMGP23515 440 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BOP23527 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BBP33778 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SNCAP37840 140 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SULT1A2P50226 295 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BDP58876 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BCP62807 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 NAAAQ02083 359 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST2H2BEQ16778 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 RPUSD3Q6P087 351 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 Q8WTZ3 238 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BHQ93079 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BNQ99877 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 HIST1H2BMQ99879 126 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 FAAP24Q9BTP7 215 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 CENPEQ02224 2701 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
SFSWAP-210ENST00000541286 LRRC3CA6NJW4 275 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 SCGNO76038 276 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 CD37P11049 281 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 MTCP1P56278 107 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 UBE2V2Q15819 145 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 DOK3Q7L591 496 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 SNX22Q96L94 193 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 MRGPRX4Q96LA9 322 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 NMES1Q9C002 83 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 RALYQ9UKM9 306 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 HIST1H1BP16401 226 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 PRR30Q53SZ7 412 aaPredicted RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 DHRS7CA6NNS2 312 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 NXPH3O95157 252 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 P04436 131 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 LY6DQ14210 128 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 EIF5AL1Q6IS14 154 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 ZCCHC14Q8WYQ9 949 aaKnown RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 C2orf50Q96LR7 162 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 TP53TG5Q9Y2B4 290 aa12.39□□□□□ -0.43
SFSWAP-210ENST00000541286 CRYBG3Q68DQ2 2970 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 IFNL4K9M1U5 179 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 NKX6-1P78426 367 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 NHLH2Q02577 135 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms