RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FAM3CQ92520 227 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.34□□□□□ -1.87
YBX3-210ENST00000540975 CREB3L1Q96BA8 519 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 CPNE2Q96FN4 548 aaPredicted RBP3.34□□□□□ -1.87
YBX3-210ENST00000540975 MED8Q96G25 268 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 ZFP3Q96NJ6 502 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 KLF6Q99612 283 aaPredicted RBP3.34□□□□□ -1.87
YBX3-210ENST00000540975 PHB2Q99623 299 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 VPS25Q9BRG1 176 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 ILKAPQ9H0C8 392 aaPredicted RBP3.34□□□□□ -1.87
YBX3-210ENST00000540975 IFI27L2Q9H2X8 130 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 POPDC2Q9HBU9 364 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 WFDC1Q9HC57 220 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 HMG20AQ9NP66 347 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 LHX9Q9NQ69 397 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 SMOXQ9NWM0 555 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 BFARQ9NZS9 450 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 MEMO1Q9Y316 297 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 ATAD5Q96QE3 1844 aa3.34□□□□□ -1.87
YBX3-210ENST00000540975 ATRNO75882 1429 aa3.34□□□□□ -1.88
YBX3-210ENST00000540975 C10orf71Q711Q0 1435 aa3.34□□□□□ -1.88
YBX3-210ENST00000540975 ADAMTSL3P82987 1691 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 UBR1Q8IWV7 1749 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 MYH4Q9Y623 1939 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 A0A1B0GVI7 797 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CLDN25C9JDP6 229 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 H7C2Y5 167 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SS18L1O75177 396 aaPredicted RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 KCNK2O95069 426 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CNIH1O95406 144 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 IGKV5-2P06315 115 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TRAPPC2P0DI81 140 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TRAPPC2BP0DI82 140 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 C1GALT1C1LP0DN25 315 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 GABRA1P14867 456 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 COX5AP20674 150 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 HTR2CP28335 458 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 DDTP30046 118 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 ADORA1P30542 326 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SDC4P31431 198 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 S100A11P31949 105 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 DDOSTP39656 456 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CD200P41217 278 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 AKR1C3P42330 323 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 P2RY1P47900 373 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 PSMD8P48556 350 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TTPAP49638 278 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 RAP1AP62834 184 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 INCA1Q0VD86 236 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SKP2Q13309 424 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 BIKQ13323 160 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 MOBPQ13875 183 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR8G1Q15617 311 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 POU2AF1Q16633 256 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 ATP6V1FQ16864 119 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TMEM176BQ3YBM2 270 aaPredicted RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 PARP15Q460N3 678 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CDNFQ49AH0 187 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TMEM255AQ5JRV8 349 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 RBM48Q5RL73 367 aaKnown RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 XKRXQ6PP77 449 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TCF24Q7RTU0 167 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 MOB3BQ86TA1 216 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 MRPL52Q86TS9 123 aaKnown RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 RIMKLAQ8IXN7 391 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 LGI3Q8N145 548 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR6V1Q8N148 313 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 METTL13Q8N6R0 699 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 C8orf31Q8N9H6 132 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SDR9C7Q8NEX9 313 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR7G2Q8NG99 324 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR4M1Q8NGD0 313 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR9Q1Q8NGQ5 310 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 OR5AK3PQ8NH89 298 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 LGALS14Q8TCE9 139 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 GHSRQ92847 366 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 ZHX1-C8orf76Q96EF9 292 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 BTN2A3PQ96KV6 586 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 ZNF75AQ96N20 296 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SORT1Q99523 831 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 C1orf50Q9BV19 199 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TLNRD1Q9H1K6 362 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 CDC42EP4Q9H3Q1 356 aaKnown RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 SLC17A5Q9NRA2 495 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 FBXO6Q9NRD1 293 aaPredicted RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 AGPAT4Q9NRZ5 378 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 DDIT4Q9NX09 232 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 BAIAP2Q9UQB8 552 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 LMO7Q8WWI1 1683 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 TIAM2Q8IVF5 1701 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
YBX3-210ENST00000540975 LAMB1P07942 1786 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 RGPD5Q99666 1765 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 SCN4AP35499 1836 aa3.33□□□□□ -1.88
YBX3-210ENST00000540975 PHF3Q92576 2039 aaKnown RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 A0A087WXM4 84 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms