RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 Q6ZS49 121 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 SLC25A26Q70HW3 274 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 MOB1BQ7L9L4 216 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 FBXL14Q8N1E6 418 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 WDR31Q8NA23 367 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 BEST4Q8NFU0 473 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 OR8G5Q8NG78 346 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 OR5AP2Q8NGF4 316 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 OR5D18Q8NGL1 313 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 ZNF431Q8TF32 576 aaPredicted RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 ARHGAP5-AS1Q96IT6 56 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 CMSS1Q9BQ75 279 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 SOX7Q9BT81 388 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 PPA2Q9H2U2 334 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 ZNF286AQ9HBT8 521 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 NECAP2Q9NVZ3 263 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 RASL12Q9NYN1 266 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 TREM2Q9NZC2 230 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 MYEF2Q9P2K5 600 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 FBXO9Q9UK97 447 aaPredicted RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 PAIP2BQ9ULR5 123 aaKnown RBP7.08□□□□□ -1.28
CHD4-208ENST00000540960 KCNK7Q9Y2U2 307 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
CHD4-208ENST00000540960 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 MEIKINA0A087WXM9 373 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 A0A0B4J2A0 478 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 PLSCR5A0PG75 271 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 C5orf63A6NC05 138 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 FAM172BPA6NC97 362 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 CEACAM18A8MTB9 384 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SOCS1O15524 211 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 TIMM8AO60220 97 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 DIRAS3O95661 229 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 NGFP01138 241 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 GIPP09681 153 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 SULT1A3P0DMM9 295 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SULT1A4P0DMN0 295 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 TNFSF4P23510 183 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 GABRR1P24046 479 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 PTAFRP25105 342 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 CHATP28329 748 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 CCKARP32238 428 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 GLRXP35754 106 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 GPM6AP51674 278 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 FOXG1P55316 489 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 TMEM50BP56557 158 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 CYCSP99999 105 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 PLA2G7Q13093 441 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 CR1LQ2VPA4 569 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 MOGAT2Q3SYC2 334 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SCGB2B2Q4G0G5 96 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 FAM76BQ5HYJ3 339 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 FAM209AQ5JX71 171 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 ATAD3CQ5T2N8 411 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 ZNF626Q68DY1 528 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 RGS7BPQ6MZT1 257 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 RFPL4BQ6ZWI9 263 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 NOXA1Q86UR1 476 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 FAM90A1Q86YD7 464 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 C1QL4Q86Z23 238 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 LILRB1Q8NHL6 650 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 SLC25A40Q8TBP6 338 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 KLF14Q8TD94 323 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 EMG1Q92979 244 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 MSI2Q96DH6 328 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 ST6GAL2Q96JF0 529 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 PHB2Q99623 299 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SYT3Q9BQG1 590 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 OR51I2Q9H344 312 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 ZNF442Q9H7R0 627 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SEBOXQ9HB31 216 aaPredicted RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 RAB9BQ9NP90 201 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 ZNF69Q9UC07 566 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 SHPKQ9UHJ6 478 aa7.07□□□□□ -1.28
CHD4-208ENST00000540960 PURGQ9UJV8 347 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 C14orf166Q9Y224 244 aaKnown RBP7.07□□□□□ -1.28
CHD4-208ENST00000540960 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 BOLA2-SMG1P6H3BVE0 249 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 SH2D1BO14796 132 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 OR7C1O76099 320 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 CECR9P0C854 216 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 DANCRP0C864 163 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 CCL2P13500 99 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 HNF1AP20823 631 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 FPR2P25090 351 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 HRH1P35367 487 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 CD83Q01151 205 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 NAAAQ02083 359 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 HLXQ14774 488 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 TAF9Q16594 264 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 TMEM128Q5BJH2 165 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 PLAC9Q5JTB6 97 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms