RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 MRPS28Q9Y2Q9 187 aaKnown RBP12.21□□□□□ -0.45
UBE3B-212ENST00000540230 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-212ENST00000540230 SESN1Q9Y6P5 492 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 IGHV2-26A0A0B4J1V2 119 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 SC5DO75845 299 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.46
UBE3B-212ENST00000540230 JUNBP17275 347 aaPredicted RBP12.21□□□□□ -0.46
UBE3B-212ENST00000540230 VHLP40337 213 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 RAG2P55895 527 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 PLA1AQ53H76 456 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 NHLRC3Q5JS37 347 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 CORO2AQ92828 525 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 KIF25Q9UIL4 384 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 RAB26Q9ULW5 256 aa12.21□□□□□ -0.46
UBE3B-212ENST00000540230 MEGF11A6BM72 1044 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 OR7C1O76099 320 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-212ENST00000540230 CRYBA1P05813 215 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 CDK2P24941 298 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 LGALS4P56470 323 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 DYNC1I2Q13409 638 aaKnown RBP12.2□□□□□ -0.46
UBE3B-212ENST00000540230 LY6EQ16553 131 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 RSBN1Q5VWQ0 802 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-212ENST00000540230 BRICD5Q6PL45 260 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 GLIPR1L1Q6UWM5 242 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 PRSS48Q7RTY5 328 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 SUMF2Q8NBJ7 301 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 OR13A1Q8NGR1 328 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 PIFOQ8TCI5 191 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 TMEM203Q969S6 136 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 S100A13Q99584 98 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
UBE3B-212ENST00000540230 CMYA5Q8N3K9 4069 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 TRAV39A0A0B4J263 110 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 FUOMA2VDF0 154 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 NDUFA7O95182 113 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-212ENST00000540230 RPS25P62851 125 aaKnown RBP12.19□□□□□ -0.46
UBE3B-212ENST00000540230 LRRC75BQ2VPJ9 315 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 AWAT2Q6E213 333 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 HEPN1Q6WQI6 88 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 LRRTM1Q86UE6 522 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 MS4A15Q8N5U1 240 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 UFD1Q92890 307 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 DPCDQ9BVM2 203 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-212ENST00000540230 TAS2R3Q9NYW6 316 aa12.19□□□□□ -0.46
UBE3B-212ENST00000540230 MEIKINA0A087WXM9 373 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 CGB3P0DN86 165 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 CGB7P0DN87 165 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 GLP1RP43220 463 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 RAB13P51153 203 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 SRSF4Q08170 494 aaKnown RBP12.18□□□□□ -0.46
UBE3B-212ENST00000540230 TPBGQ13641 420 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 SSX2Q16385 188 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 RBM48Q5RL73 367 aaKnown RBP12.18□□□□□ -0.46
UBE3B-212ENST00000540230 TMEM91Q6ZNR0 172 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 Q6ZSV7 163 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 CEACAM19Q7Z692 300 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 OR4P4Q8NGL7 312 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 OR5R1Q8NH85 324 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 CLEC7AQ9BXN2 247 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 GAL3ST2Q9H3Q3 398 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 BANF2Q9H503 90 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 IFT22Q9H7X7 185 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 ZNF286AQ9HBT8 521 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 TBL2Q9Y4P3 447 aaKnown RBP12.18□□□□□ -0.46
UBE3B-212ENST00000540230 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
UBE3B-212ENST00000540230 ZNF780AO75290 641 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-212ENST00000540230 GTF2F2P13984 249 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 RPL15P61313 204 aaKnown RBP12.17□□□□□ -0.46
UBE3B-212ENST00000540230 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-212ENST00000540230 GPR50Q13585 617 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-212ENST00000540230 CDH26Q8IXH8 852 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 MRGPRDQ8TDS7 321 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 THRSPQ92748 146 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-212ENST00000540230 KCNK15Q9H427 330 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
UBE3B-212ENST00000540230 ZNF729A6NN14 1252 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-212ENST00000540230 CHST1O43916 411 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 UCHL1P09936 223 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 CPEP16870 476 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 SSTR5P35346 364 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 KRTAP10-3P60369 221 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 PAX5Q02548 391 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-212ENST00000540230 FAM189A2Q15884 450 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 MPV17LQ2QL34 196 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 HSD17B12Q53GQ0 312 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms