RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SF3B5Q9BWJ5 86 aaKnown RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 RGCCQ9H4X1 137 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 EDARQ9UNE0 448 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 PCNX2A6NKB5 2137 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 RAB1AP62820 205 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 EIF5AP63241 154 aaKnown RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 PLGLB1Q02325 96 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 GNMTQ14749 295 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 HAGHQ16775 308 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 INTS12Q96CB8 462 aaKnown RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 TAAR5O14804 337 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 MPPED1O15442 326 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 RRP8O43159 456 aaKnown RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 RHBDL1O75783 438 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 MMP7P09237 267 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 ALKBH2Q6NS38 261 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 C6orf15Q6UXA7 325 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 FAM24BQ8N5W8 94 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 DMBX1Q8NFW5 382 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 SYT3Q9BQG1 590 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 ARRDC1-AS1Q9H2J1 176 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 FBXO9Q9UK97 447 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 A0A1W2PPE3 182 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 GLAP06280 429 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.539e-6■□□□□ 9.4
BNIP3-202ENST00000540159 FOXO1Q12778 655 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 MOB3AQ96BX8 217 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 DEFB127Q9H1M4 99 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 HSF4Q9ULV5 492 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 CER1O95813 267 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 TFF1P04155 84 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 DTYMKP23919 212 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
BNIP3-202ENST00000540159 DVL1P1P54792 670 aaPredicted RBP11.72□□□□□ -0.53
BNIP3-202ENST00000540159 ADAM5Q6NVV9 412 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 RBMS3Q6XE24 437 aaKnown RBP11.72□□□□□ -0.53
BNIP3-202ENST00000540159 RNASE11Q8TAA1 199 aaKnown RBP11.72□□□□□ -0.53
BNIP3-202ENST00000540159 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 PRSS50Q9UI38 385 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 ADGRG4Q8IZF6 3080 aa11.72□□□□□ -0.53
BNIP3-202ENST00000540159 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 CNOT4O95628 575 aaKnown RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 CD5P06127 495 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 CA6P23280 308 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF154Q13106 437 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 ABHD17BQ5VST6 288 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 FAM53AQ6NSI3 398 aaPredicted RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 NUFIP2Q7Z417 695 aaKnown RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 DPPA2Q7Z7J5 298 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 IQCF2Q8IXL9 164 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 OR2G3Q8NGZ4 309 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 CACFD1Q9UGQ2 172 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 IL17BQ9UHF5 180 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 RBM7Q9Y580 266 aaKnown RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 WRBO00258 174 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 NEURL1O76050 574 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 TK1P04183 234 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 GFRA1P56159 465 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 TMEM42Q69YG0 159 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 ABLIM2Q6H8Q1 611 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.53
BNIP3-202ENST00000540159 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
BNIP3-202ENST00000540159 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF98A6NK75 572 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 TMEM50AO95807 157 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 SNCAP37840 140 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 PCBD1P61457 104 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 RPS16P62249 146 aaKnown RBP11.71□□□□□ -0.54
BNIP3-202ENST00000540159 OR8B8Q15620 311 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 TMPRSS7Q7RTY8 843 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 CXorf67Q86X51 503 aaPredicted RBP11.71□□□□□ -0.54
BNIP3-202ENST00000540159 OR2C3Q8N628 320 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 OR2M7Q8NG81 312 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 C10orf35Q96D05 121 aa11.71□□□□□ -0.54
BNIP3-202ENST00000540159 PIEZO2Q9H5I5 2752 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 COLCA2A8K830 154 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF724A8MTY0 619 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms