RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 HMG20AQ9NP66 347 aa12.12□□□□□ -0.47
USB1-203ENST00000539737 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
USB1-203ENST00000539737 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 PTGFRP43088 359 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 LOXL3P58215 753 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 COL10A1Q03692 680 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 RSU1Q15404 277 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 KCTD21Q4G0X4 260 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 CDH26Q8IXH8 852 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 ORAI1Q96D31 301 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
USB1-203ENST00000539737 SSX3Q99909 188 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
USB1-203ENST00000539737 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 IL36RNQ9UBH0 155 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 FBLN5Q9UBX5 448 aa12.11□□□□□ -0.47
USB1-203ENST00000539737 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 A0A1W2PPK0 400 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 K7N7A8 449 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 ZNF780AO75290 641 aaPredicted RBP12.1□□□□□ -0.47
USB1-203ENST00000539737 ZNF737O75373 536 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 SC5DO75845 299 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 MPIG6BO95866 241 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 TK1P04183 234 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 OR3A4PP47883 348 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 SNU13P55769 128 aaKnown RBP12.1□□□□□ -0.47
USB1-203ENST00000539737 RPL31P62899 125 aaKnown RBP12.1□□□□□ -0.47
USB1-203ENST00000539737 EMX1Q04741 257 aaPredicted RBP12.1□□□□□ -0.47
USB1-203ENST00000539737 HSD17B12Q53GQ0 312 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 ZNF773Q6PK81 442 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 UNQ9370/PRO34162Q6UXP9 181 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 CHST4Q8NCG5 386 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 CFHR4Q92496 578 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 PHYHIPQ92561 330 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 SNX22Q96L94 193 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 PCDHB16Q9NRJ7 776 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 GSTK1Q9Y2Q3 226 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 LRRC42Q9Y546 428 aa12.1□□□□□ -0.47
USB1-203ENST00000539737 MAGEA13PA6NCF6 341 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 SH2D1BO14796 132 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 MAS1P04201 325 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 UCHL1P09936 223 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 GABRR1P24046 479 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 LGALS4P56470 323 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 RPS25P62851 125 aaKnown RBP12.09□□□□□ -0.47
USB1-203ENST00000539737 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 UBE2UQ5VVX9 321 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 GDPD3Q7L5L3 318 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 CEACAM19Q7Z692 300 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 SPARTQ8N0X7 666 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 DTX3Q8N9I9 347 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 UQCC2Q9BRT2 126 aa12.09□□□□□ -0.47
USB1-203ENST00000539737 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 OR2H2O95918 312 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 CSTBP04080 98 aaKnown RBP12.08□□□□□ -0.48
USB1-203ENST00000539737 CALCBP10092 127 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 ZNF44P15621 663 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 RAB13P51153 203 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 GPR176Q14439 515 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 INSL4Q14641 139 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 GRK1Q15835 563 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 TMEM95Q3KNT9 176 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 Q6ZS46 218 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 Q8NFD4 153 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 OR51T1Q8NGJ9 327 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 FOXRED1Q96CU9 486 aaPredicted RBP12.08□□□□□ -0.48
USB1-203ENST00000539737 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
USB1-203ENST00000539737 RAB18Q9NP72 206 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 C19orf12Q9NSK7 152 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 NDUFB11Q9NX14 153 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 ING4Q9UNL4 249 aa12.08□□□□□ -0.48
USB1-203ENST00000539737 MRPS28Q9Y2Q9 187 aaKnown RBP12.08□□□□□ -0.48
USB1-203ENST00000539737 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 TMEM82A0PJX8 343 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
USB1-203ENST00000539737 SIRPB1O00241 398 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 MGST3O14880 152 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 CDRT1O95170 752 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 HTR3BO95264 441 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 IGLL1P15814 213 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 JUNBP17275 347 aaPredicted RBP12.07□□□□□ -0.48
USB1-203ENST00000539737 PSMB9P28065 219 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 DUSP1P28562 367 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 NHLRC3Q5JS37 347 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 FAM27D1Q5T7N8 215 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 GLT8D1Q68CQ7 371 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 AWAT2Q6E213 333 aa12.07□□□□□ -0.48
USB1-203ENST00000539737 LINC00596Q86U02 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms