RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MGMTP16455 207 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 SERPINA2P20848 420 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 GABRA2P47869 451 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR3A1P47881 315 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 RBM11P57052 281 aaKnown RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 TAS2R20P59543 309 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 RPS27AP62979 156 aaKnown RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 IFITM3Q01628 133 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 MADCAM1Q13477 382 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 BAK1Q16611 211 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 SPIN3Q5JUX0 258 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 Q71RC1 249 aaPredicted RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 IZUMO1Q8IYV9 350 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR4S1Q8NGB4 309 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR8B3Q8NGG8 313 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR10R2Q8NGX6 335 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 FCAMRQ8WWV6 532 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR8B2Q96RD0 313 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 SSBP3Q9BWW4 388 aaPredicted RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 TM2D1Q9BX74 207 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 SELENOIQ9C0D9 397 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 LPAR5Q9H1C0 372 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 PCDHB10Q9UN67 800 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 B4DSR2 109 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 H3BUI4 141 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 GABARAPH6UMI1 98 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 K7N7A8 449 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 SIRPB1O00241 398 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 SULT1C2O00338 296 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 TK1P04183 234 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 IL7P13232 177 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 PRSS3P35030 304 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 VEGFCP49767 419 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 GZMKP49863 264 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 DEFA1P59665 94 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 DEFA3P59666 94 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 IL13RA1P78552 427 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 ARL6IP1Q15041 203 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 KCNJ8Q15842 424 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 CDNFQ49AH0 187 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 TRIQKQ629K1 86 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 STEAP3Q658P3 488 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 CYB5R2Q6BCY4 276 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
CCDC42-202ENST00000539522 SNX29P2Q8IUI4 249 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 LYSMD2Q8IV50 215 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 OSR2Q8N2R0 312 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 CHST4Q8NCG5 386 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 Q96M66 194 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 NICN1Q9BSH3 213 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 CHST6Q9GZX3 395 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 AUNIPQ9H7T9 357 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 CLN8Q9UBY8 286 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 OPN4Q9UHM6 478 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 ST3GAL6Q9Y274 331 aa10.73□□□□□ -0.69
CCDC42-202ENST00000539522 FN1P02751 2386 aaKnown RBP10.72□□□□□ -0.69
CCDC42-202ENST00000539522 TGFAP01135 160 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 MELTFP08582 738 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 GSTT2BP0CG30 244 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 CPT2P23786 658 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 INPP1P49441 399 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 DVL1P1P54792 670 aaPredicted RBP10.72□□□□□ -0.69
CCDC42-202ENST00000539522 GNB2P62879 340 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 IL13RA2Q14627 380 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 TAF9Q16594 264 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 BRICD5Q6PL45 260 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 Q6ZPA2 131 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 BTN2A1Q7KYR7 527 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 ZNF561Q8N587 486 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 C11orf42Q8N5U0 333 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 C8orf46Q8TAG6 207 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 SETD6Q8TBK2 473 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 ST8SIA4Q92187 359 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 TMEM186Q96B77 213 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 RAB3CQ96E17 227 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 COQ2Q96H96 371 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 DCTN5Q9BTE1 182 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 TMPRSS13Q9BYE2 586 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 IFT22Q9H7X7 185 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 C19orf12Q9NSK7 152 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 HIF1ANQ9NWT6 349 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 RCC2Q9P258 522 aaKnown RBP10.72□□□□□ -0.69
CCDC42-202ENST00000539522 SLC25A10Q9UBX3 287 aaPredicted RBP10.72□□□□□ -0.69
CCDC42-202ENST00000539522 INSIG2Q9Y5U4 225 aa10.72□□□□□ -0.69
CCDC42-202ENST00000539522 NF1P21359 2839 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 IGHV2-70DA0A0C4DH43 119 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A10PA6NDY2 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A18PA6NE21 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A16PA6NEW6 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A20PA6NIJ5 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A8PA6NJQ4 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A7PA6NKC0 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A22PA8MWA6 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A12PA8MX19 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A5PA8MXJ8 464 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms