RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR4K2Q8NGD2 314 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 OR5L1Q8NGL2 311 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 OR2G2Q8NGZ5 317 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 FAM81AQ8TBF8 368 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 PTH2Q96A98 100 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM56Q96MV1 263 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 CGREF1Q99674 301 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF251Q9BRH9 671 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 RPF2Q9H7B2 306 aaKnown RBP0.65□□□□□ -2.31
HIF1A-204ENST00000539097 ABCB9Q9NP78 766 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF629Q9UEG4 869 aaPredicted RBP0.65□□□□□ -2.31
HIF1A-204ENST00000539097 VPREB3Q9UKI3 123 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM56-RWDD3S4R434 201 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 ANK1P16157 1881 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 NRAPQ86VF7 1730 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 SAMD9Q5K651 1589 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 SAMD9LQ8IVG5 1584 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 DOCK6Q96HP0 2047 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 RELNP78509 3460 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 MYH6P13533 1939 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 CRB1P82279 1406 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 UHRF1BP1Q6BDS2 1440 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 VPS8Q8N3P4 1428 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 SETD5Q9C0A6 1442 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 COL6A3P12111 3177 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 PTPRJQ12913 1337 aa0.65□□□□□ -2.31
HIF1A-204ENST00000539097 NWD2Q9ULI1 1742 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FAM166BA8MTA8 275 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 AQP9O43315 295 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SC5DO75845 299 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PTTG1O95997 202 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IFNA6P05013 189 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GGT1P19440 569 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TCN2P20062 427 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HLA-DMAP28067 261 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GTF2E2P29084 291 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OPRM1P35372 400 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 RFC3P40938 356 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MAGEA2P43356 314 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IDH2P48735 452 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 UBE2NP61088 152 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SELENOTP62341 195 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TNFRSF9Q07011 255 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GPR176Q14439 515 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF266Q14584 549 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ATP6V1FQ16864 119 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM183BQ1AE95 376 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CEACAM16Q2WEN9 425 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 DHRS4L2Q6PKH6 230 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF493Q6ZR52 646 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HORMAD1Q86X24 394 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF547Q8IVP9 402 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM183AQ8IXX5 376 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 Q8N402 240 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLC25A45Q8N413 288 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 DUSP18Q8NEJ0 188 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OR9A2Q8NGT5 310 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FLYWCH2Q96CP2 140 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF75AQ96N20 296 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SERPINB11Q96P15 392 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OR2M4Q96R27 311 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GABRG3Q99928 467 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF649Q9BS31 505 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PLA2G2FQ9BZM2 168 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CHST5Q9GZS9 411 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PIGUQ9H490 435 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ASB7Q9H672 318 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 METTL17Q9H7H0 456 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM9BQ9NQ34 198 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FBXO8Q9NRD0 319 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FBXO6Q9NRD1 293 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLC2A9Q9NRM0 540 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HEBP1Q9NRV9 189 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM100Q9NV29 134 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNHIT6Q9NWK9 470 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 BABAM2Q9NXR7 383 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TAS2R5Q9NYW4 299 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 UBAP1Q9NZ09 502 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PSORS1C2Q9UIG4 136 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CES1P1Q9UKY3 287 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PRELID1Q9Y255 219 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 URGCP-MRPS24S4R325 110 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MUC3AQ02505 3323 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CCDC144AA2RUR9 1427 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ARHGAP31Q2M1Z3 1444 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PPLO60437 1756 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IGKV1-27A0A075B6S5 117 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 A0A087WX48 190 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TEX50A0A1B0GTY4 177 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PRORSD1PA6NEY8 169 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 D6RAR5 112 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PRAMEF26H0Y7S4 382 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 H7C417 338 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 NUPL2O15504 423 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SUPT3HO75486 399 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TRAPPC6AO75865 159 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 RCBTB2O95199 551 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 EPPINO95925 133 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TRBV12-3P01733 135 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV1-46P01743 117 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms