RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ZNF880Q6PDB4 577 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 FIP1L1Q6UN15 594 aaKnown RBP12.55□□□□□ -0.4
ATL3-203ENST00000538786 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 C11orf53Q8IXP5 236 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 OR5T2Q8NGG2 359 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 RTN4IP1Q8WWV3 396 aaPredicted RBP12.55□□□□□ -0.4
ATL3-203ENST00000538786 SNRNP40Q96DI7 357 aaKnown RBP12.55□□□□□ -0.4
ATL3-203ENST00000538786 GALNT14Q96FL9 552 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 RSRP1Q9BUV0 290 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 NAA60Q9H7X0 242 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 RDH8Q9NYR8 311 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 KCNIP3Q9Y2W7 256 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 MAB21L2Q9Y586 359 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 APC2O95996 2303 aa12.55□□□□□ -0.4
ATL3-203ENST00000538786 A0A0D9SG52 128 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 A0A0G2JNJ9 132 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 IGHV3-64DA0A0J9YX35 117 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 SLC33A1O00400 549 aaPredicted RBP12.54□□□□□ -0.4
ATL3-203ENST00000538786 RP2O75695 350 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 DIRAS3O95661 229 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
ATL3-203ENST00000538786 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 ZNF345Q14585 488 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 PAN3Q58A45 887 aaKnown RBP12.54□□□□□ -0.4
ATL3-203ENST00000538786 ALKBH2Q6NS38 261 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 VRK1Q99986 396 aaPredicted RBP12.54□□□□□ -0.4
ATL3-203ENST00000538786 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 TMEM165Q9HC07 324 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 SLC2A9Q9NRM0 540 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 Q9UFV3 132 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 PRRC2CQ9Y520 2896 aaKnown RBP12.54□□□□□ -0.4
ATL3-203ENST00000538786 BET1O15155 118 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 OR2F2O95006 317 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 FAM87AP0C7U9 286 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 ZNF250P15622 560 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 FAM27E3Q08E93 113 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 OR2F1Q13607 317 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 OR8H3Q8N146 312 aa12.54□□□□□ -0.4
ATL3-203ENST00000538786 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
ATL3-203ENST00000538786 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 SIRPB1O00241 398 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 AP2S1P53680 142 aaPredicted RBP12.53□□□□□ -0.4
ATL3-203ENST00000538786 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 GAPTQ8N292 157 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 CCDC71LQ8N9Z2 235 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 OR10C1Q96KK4 312 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 C2orf50Q96LR7 162 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 USB1Q9BQ65 265 aaKnown RBP12.53□□□□□ -0.4
ATL3-203ENST00000538786 SUCNR1Q9BXA5 334 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 PCDHB10Q9UN67 800 aa12.53□□□□□ -0.4
ATL3-203ENST00000538786 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 A6NLC8 198 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 TUSC2O75896 110 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 HOXB5P09067 269 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 GLRXP35754 106 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.4
ATL3-203ENST00000538786 HLA-DRB3P79483 266 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 PRAMEF6Q5VXH4 476 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 WDR82Q6UXN9 313 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 ZNF826PQ6ZT77 177 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 MOB1BQ7L9L4 216 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 GLS2Q9UI32 602 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 RAXQ9Y2V3 346 aa12.52□□□□□ -0.4
ATL3-203ENST00000538786 ACACAQ13085 2346 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 RNF222A6NCQ9 220 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 HAND1O96004 215 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 RCC1P18754 421 aaPredicted RBP12.52□□□□□ -0.41
ATL3-203ENST00000538786 IL15RAQ13261 267 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 TMEM187Q14656 261 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
ATL3-203ENST00000538786 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
ATL3-203ENST00000538786 ACOT7LQ6ZUV0 252 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 C5orf24Q7Z6I8 188 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 PLPPR1Q8TBJ4 325 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 DUSP13Q9UII6 198 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
ATL3-203ENST00000538786 ANKRD11Q6UB99 2663 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms