RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 CD33P20138 364 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 ANOS1P23352 680 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 BCL6P41182 706 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 EMDP50402 254 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 ASCL1P50553 236 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 SMAD3P84022 425 aaKnown RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 TLE3Q04726 772 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 GLIPR1L1Q6UWM5 242 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 LSRQ86X29 649 aaPredicted RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 RTN4IP1Q8WWV3 396 aaPredicted RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 GMPPAQ96IJ6 420 aaPredicted RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 LMF2Q9BU23 707 aaKnown RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 OR10A2Q9H208 303 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 MOB1AQ9H8S9 216 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 ZDHHC11Q9H8X9 412 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 G6PC2Q9NQR9 355 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 PNO1Q9NRX1 252 aaKnown RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 EMC9Q9Y3B6 208 aa10.8□□□□□ -0.68
USP3-203ENST00000538686 PTRH2Q9Y3E5 179 aaKnown RBP10.8□□□□□ -0.68
USP3-203ENST00000538686 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 GRXCR1A8MXD5 290 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 SIRPB1O00241 398 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 ZNF737O75373 536 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 STAG3L3P0CL85 134 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 PSMB3P49720 205 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 MRPS34P82930 218 aaKnown RBP10.79□□□□□ -0.68
USP3-203ENST00000538686 SERF2P84101 59 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 SQSTM1Q13501 440 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 SPIN3Q5JUX0 258 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 TMEM108Q6UXF1 575 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 Q6ZVH6 145 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 VASH2Q86V25 355 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 BAGE2Q86Y30 109 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 ZNF440Q8IYI8 595 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 FAM89BQ8N5H3 189 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 CCDC71LQ8N9Z2 235 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
USP3-203ENST00000538686 A0A1B0GUS0 222 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 H7C1C5 153 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 CXCL11O14625 94 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 SPINT1O43278 529 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 BGLAPP02818 100 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 ASAH2BP0C7U1 165 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 ZNF728P0DKX0 622 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 CPMP14384 443 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 LGALS7P47929 136 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 NTHL1P78549 312 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 RUNX1Q01196 453 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 FMODQ06828 376 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 CLEC12BQ2HXU8 276 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 KIF26BQ2KJY2 2108 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 ABHD12BQ7Z5M8 362 aaPredicted RBP10.78□□□□□ -0.68
USP3-203ENST00000538686 SAXO1Q8IYX7 474 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 ZIC4Q8N9L1 334 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 OR1E3Q8WZA6 343 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
USP3-203ENST00000538686 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 SRCAPQ6ZRS2 3230 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 A0A1W2PNV4 684 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 C17orf112F2Z3M2 114 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 GDF9O60383 454 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 NKX2-2O95096 273 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 GPX1P07203 203 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 OMGP23515 440 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 UCP1P25874 307 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 ARG2P78540 354 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 LCN15Q6UWW0 184 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 Q6ZNB5 142 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 SCGB1C1Q8TD33 95 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 DAZLQ92904 295 aaKnown RBP10.78□□□□□ -0.68
USP3-203ENST00000538686 MMP25Q9NPA2 562 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 PLSCR4Q9NRQ2 329 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 RPRMQ9NS64 109 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 TP53TG3Q9ULZ0 132 aa10.78□□□□□ -0.68
USP3-203ENST00000538686 HEATR5BQ9P2D3 2071 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 SAA2-SAA4A0A096LPE2 208 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 TRAV34A0A0B4J273 112 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 P2RY10O00398 339 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 CD70P32970 193 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 SLC6A8P48029 635 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 LHX2P50458 406 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 LINC00310P59036 64 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 RPL18Q07020 188 aaKnown RBP10.77□□□□□ -0.69
USP3-203ENST00000538686 RTP5Q14D33 572 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 ZNF141Q15928 474 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 C19orf35Q6ZS72 473 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 ASB10Q8WXI3 467 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 S1PR5Q9H228 398 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 CLEC5AQ9NY25 188 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 IGKV1D-42A0A075B6H8 117 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 LINC01553A4QN01 128 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 DPRXA6NFQ7 191 aa10.77□□□□□ -0.69
USP3-203ENST00000538686 TRAPPC2LH3BP13 241 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms