RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZDHHC8Q9ULC8 765 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 MED12LQ86YW9 2145 aa21.3■■□□□ 1
RAB40C-204ENST00000538492 SLC22A20A6NK97 555 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 NUDT19A8MXV4 375 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 SULT1A2P50226 295 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 MPV17LQ2QL34 196 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 ZNF818PQ6ZRF7 136 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 MDP1Q86V88 176 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 ZFHX4Q86UP3 3567 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 TRGV5A0A0B4J1U4 118 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 IGKV1D-13A0A0B4J2D9 117 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 IGKV1-13P0DP09 117 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 CA6P23280 308 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 ZNF766Q5HY98 468 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 FBXW9Q5XUX1 488 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 ZNF565Q8N9K5 539 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 RDH5Q92781 318 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 UQCC1Q9NVA1 299 aa21.29■■□□□ 1
RAB40C-204ENST00000538492 CDK2AP1O14519 115 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 MUC1P15941 1255 aaPredicted RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 PMP22Q01453 160 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 TMEM88Q6PEY1 159 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 GAPTQ8N292 157 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 SUMF2Q8NBJ7 301 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 UBE2J1Q9Y385 318 aaPredicted RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 TMED3Q9Y3Q3 217 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 ST8SIA3O43173 380 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 C20orf204Q6ZNR8 217 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 Q6ZS49 121 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 BCL2L2Q92843 193 aaPredicted RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 USB1Q9BQ65 265 aaKnown RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 TMEM222Q9H0R3 208 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 WFDC1Q9HC57 220 aa21.28■■□□□ 1
RAB40C-204ENST00000538492 RCL1Q9Y2P8 373 aaKnown RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 SPENQ96T58 3664 aaKnown RBP21.28■■□□□ 1
RAB40C-204ENST00000538492 CFAP47Q6ZTR5 3102 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 IGKV1-6A0A0C4DH72 117 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 A0A1W2PR80 420 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 NKX2-6A6NCS4 301 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 Q6ZRG5 221 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 SUMF1Q8NBK3 374 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 UBAC2Q8NBM4 344 aa21.27■■□□□ 1
RAB40C-204ENST00000538492 HSD17B6O14756 317 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 RHBDL1O75783 438 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 GLAP06280 429 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 KCNJ3P48549 501 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 CAV2P51636 162 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 NHLH2Q02577 135 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 OPA3Q9H6K4 179 aa21.27■□□□□ 0.99
RAB40C-204ENST00000538492 MYPOPQ86VE0 399 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-204ENST00000538492 LDLRAD3Q86YD5 345 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 TRDCB7Z8K6 153 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 GPR137BO60478 399 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 GNG3P63215 75 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 DMBX1Q8NFW5 382 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 ATP23Q9Y6H3 246 aa21.26■□□□□ 0.99
RAB40C-204ENST00000538492 ZNF806P0C7X5 589 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 ASCL1P50553 236 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 ZNF573Q86YE8 665 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 ZNF695Q8IW36 515 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 OR4D5Q8NGN0 318 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 MPC1Q9Y5U8 109 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 PRSS44E7EML9 344 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 CELA3BP08861 270 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 FAM185AQ8N0U4 392 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 CCL28Q9NRJ3 127 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 LHX6Q9UPM6 363 aa21.25■□□□□ 0.99
RAB40C-204ENST00000538492 KIR2DS1A0A191URI9 304 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 TOR1AO14656 332 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 TNFSF12O43508 249 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 KIR2DS4P43632 304 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 IL13RA2Q14627 380 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 KIR2DS1Q14954 304 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 SRSF7Q16629 238 aaKnown RBP eCLIP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 SWI5Q1ZZU3 235 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 C10orf91Q5T1B1 145 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 BTNL8Q6UX41 500 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 FAM58AQ8N1B3 248 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 MRPL30Q8TCC3 161 aaKnown RBP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 NRIP2Q9BQI9 281 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 TRAV24A0A0B4J272 114 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 TPD52L2O43399 206 aaKnown RBP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 P2RY1P47900 373 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 TRIP6Q15654 476 aaKnown RBP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 NANOS1Q8WY41 292 aaKnown RBP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 PARP11Q9NR21 331 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 ZFP57Q9NU63 452 aa21.24■□□□□ 0.99
RAB40C-204ENST00000538492 CARHSP1Q9Y2V2 147 aaKnown RBP21.24■□□□□ 0.99
RAB40C-204ENST00000538492 SLC34A2O95436 690 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 OR8U9P0C7N5 309 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 CLRN3Q8NCR9 226 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 OR8U1Q8NH10 309 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 POMT1Q9Y6A1 747 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 OR5B21A6NL26 309 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 ATP6V1G2-DDX39BF2Z307 99 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 GNMTQ14749 295 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 GPR157Q5UAW9 335 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 CBLN2Q8IUK8 224 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 GCNT2Q8N0V5 402 aa21.23■□□□□ 0.99
RAB40C-204ENST00000538492 PLK3Q9H4B4 646 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms