RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 WDR86Q86TI4 376 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 FAM185AQ8N0U4 392 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-208ENST00000538333 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 ASF1BQ9NVP2 202 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 COQ3Q9NZJ6 369 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
LIMK1-208ENST00000538333 TRAV17A0A0B4J275 112 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 K7EPK0 472 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 AQP7O14520 342 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 BET1O15155 118 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 IDH3GP51553 393 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-208ENST00000538333 RND3P61587 244 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 PPP1CBP62140 327 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 ZNF880Q6PDB4 577 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 NEK7Q8TDX7 302 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 OR2J1Q9GZK6 312 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 MS4A7Q9GZW8 240 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-208ENST00000538333 OR2S2Q9NQN1 319 aa11.94□□□□□ -0.5
LIMK1-208ENST00000538333 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 C3orf85A0A1B0GTC6 90 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 DIRAS3O95661 229 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 GLAP06280 429 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 IGKV1-13P0DP09 117 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 UBE2NP61088 152 aaKnown RBP11.93□□□□□ -0.5
LIMK1-208ENST00000538333 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 BPIFCQ8NFQ6 507 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 OR52M1Q8NGK5 317 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 C17orf50Q8WW18 174 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 USB1Q9BQ65 265 aaKnown RBP11.93□□□□□ -0.5
LIMK1-208ENST00000538333 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
LIMK1-208ENST00000538333 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 GAPDHP04406 335 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 CTXN2P0C2S0 81 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 KIR2DL2P43627 348 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 NOVA1P51513 510 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 MRPL49Q13405 166 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 MST1LQ2TV78 715 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 Q6P435 159 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 UQCC3Q6UW78 93 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 SLC35G3Q8N808 338 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 RDH5Q92781 318 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TMEM222Q9H0R3 208 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 CDH20Q9HBT6 801 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 DLL3Q9NYJ7 618 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 DMXL1Q9Y485 3027 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 CFAP47Q6ZTR5 3102 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 LRP5LA4QPB2 252 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 E5RGE8 158 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 HS3ST1O14792 307 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 CNOT4O95628 575 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 COX5AP20674 150 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TMEM33P57088 247 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 ERVK11-1P61568 191 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 EIF5AP63241 154 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 INO80CQ6PI98 192 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 SPERTQ8NA61 448 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 C9orf106Q8NAJ2 232 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 LPAR3Q9UBY5 353 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 FBXO9Q9UK97 447 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-208ENST00000538333 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 TMEM56-RWDD3S4R434 201 aa11.92□□□□□ -0.5
LIMK1-208ENST00000538333 ZFHX2Q9C0A1 2572 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-208ENST00000538333 GPR31O00270 319 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 RAC2P15153 192 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 ALKBH6Q3KRA9 238 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 VWA1Q6PCB0 445 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
LIMK1-208ENST00000538333 GAPTQ8N292 157 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 ZC4H2Q9NQZ6 224 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 ZDHHC8Q9ULC8 765 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SPEF1Q9Y4P9 236 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 IQCF6A8MYZ5 107 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 CEACAM4O75871 244 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 IGKV3-15P01624 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms