RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 SUMF2Q8NBJ7 301 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF442Q9H7R0 627 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF716A6NP11 495 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 PDCD6O75340 191 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 BCL3P20749 454 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 MAS1LP35410 378 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 RHEBQ15382 184 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 PLCXD3Q63HM9 321 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 GGNQ86UU5 652 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
CLPB-209ENST00000538039 VSIRQ9H7M9 311 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
CLPB-209ENST00000538039 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
CLPB-209ENST00000538039 TCN2P20062 427 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 PDZD11Q5EBL8 140 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 RTL6Q6ICC9 239 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 R4GN57 208 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 PCSK5Q92824 1860 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
CLPB-209ENST00000538039 CEACAM16Q2WEN9 425 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 SPIN3Q5JUX0 258 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 DOK5Q9P104 306 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 DKKL1Q9UK85 242 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
CLPB-209ENST00000538039 CXCL13O43927 109 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
CLPB-209ENST00000538039 NDUFA6P56556 154 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 DLK1P80370 383 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 TLE1Q04724 770 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 ABHD3Q8WU67 409 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 PRDM6Q9NQX0 595 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
CLPB-209ENST00000538039 STRAPQ9Y3F4 350 aaKnown RBP12.09□□□□□ -0.47
CLPB-209ENST00000538039 TP53I11O14683 189 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 CHST1O43916 411 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 EXT1Q16394 746 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 KDF1Q8NAX2 398 aaPredicted RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 ZNF488Q96MN9 340 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 SLC22A20A6NK97 555 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 LY86O95711 162 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 HOXA5P20719 270 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 UCP3P55916 312 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 GNMTQ14749 295 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 NMSQ5H8A3 153 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 Q6ZRM9 215 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 LURAP1LQ8IV03 231 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 ZNF100Q8IYN0 542 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 SSX3Q99909 188 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 ZNF700Q9H0M5 742 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 LYRM2Q9NU23 88 aaPredicted RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 PTRH2Q9Y3E5 179 aaKnown RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 DOCK10Q96BY6 2186 aa12.08□□□□□ -0.48
CLPB-209ENST00000538039 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
CLPB-209ENST00000538039 LILRA1O75019 489 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 SOD3P08294 240 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 RPS18P62269 152 aaKnown RBP12.07□□□□□ -0.48
CLPB-209ENST00000538039 MALLQ13021 153 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 CNN3Q15417 329 aaKnown RBP12.07□□□□□ -0.48
CLPB-209ENST00000538039 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 EXTL1Q92935 676 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 TMEM56Q96MV1 263 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 TMEM56-RWDD3S4R434 201 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 A0A1B0GW64 132 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 PINLYPA6NC86 204 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 ARGFXA6NJG6 315 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 TOX3O15405 576 aaPredicted RBP12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 CST2P09228 141 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 FUT3P21217 361 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HERV-K104P61576 105 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 RAC1P63000 192 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 Q0VFX4 171 aa12.07□□□□□ -0.48
CLPB-209ENST00000538039 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms