RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GABRR1P24046 479 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 DUSP1P28562 367 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 C21orf33P30042 268 aaPredicted RBP10.07□□□□□ -0.8
PRKDC-207ENST00000536483 GABRA5P31644 462 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 PTGFRP43088 359 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 EDDM3BP56851 147 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 IL13RA2Q14627 380 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 HERPUD1Q15011 391 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 Q499Y3 187 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 Q6ZTK2 550 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 PIFOQ8TCI5 191 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 FCGR1BQ92637 280 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 RFT1Q96AA3 541 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 MALSU1Q96EH3 234 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 LINC00574Q9H8X3 128 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 TAS2R4Q9NYW5 299 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 TET2Q6N021 2002 aaPredicted RBP10.07□□□□□ -0.8
PRKDC-207ENST00000536483 H3BUX3 64 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 SLC33A1O00400 549 aaPredicted RBP10.06□□□□□ -0.8
PRKDC-207ENST00000536483 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
PRKDC-207ENST00000536483 SOX2P48431 317 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 KCNJ3P48549 501 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 DYNLT3P51808 116 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 WNT4P56705 351 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 MINOS1Q5TGZ0 78 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 HEPN1Q6WQI6 88 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 SPARTQ8N0X7 666 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 OR5D18Q8NGL1 313 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 OR13F1Q8NGS4 319 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 THRSPQ92748 146 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 SESN1Q9Y6P5 492 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
PRKDC-207ENST00000536483 A0A087X0M5 115 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 A0A1B0GX30 115 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 DEGS1O15121 323 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF780AO75290 641 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-207ENST00000536483 OPN1MWP04001 364 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 CDK1P06493 297 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 CD37P11049 281 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 CD34P28906 385 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 BDKRB2P30411 391 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF93P35789 620 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-207ENST00000536483 LGALS4P56470 323 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 PPP3R1P63098 170 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 SLC35A2P78381 396 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 GPR50Q13585 617 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 DOC2BQ14184 412 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 LY6EQ16553 131 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 LRRC75BQ2VPJ9 315 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 LDLRAD2Q5SZI1 272 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 LINC00299Q6ZSB3 139 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 PRSS48Q7RTY5 328 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 RTN4RL2Q86UN3 420 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 STX19Q8N4C7 294 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 BPIFB6Q8NFQ5 453 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 RAB2BQ8WUD1 216 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 TNFAIP8L1Q8WVP5 186 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 MYDGFQ969H8 173 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 FOXRED1Q96CU9 486 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-207ENST00000536483 COQ2Q96H96 371 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 SSX3Q99909 188 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 PAK1IP1Q9NWT1 392 aaPredicted RBP10.05□□□□□ -0.8
PRKDC-207ENST00000536483 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 ERGIC3Q9Y282 383 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 DSCAML1Q8TD84 2053 aa10.05□□□□□ -0.8
PRKDC-207ENST00000536483 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 TRGV10A0A0A0MS01 117 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 ODAMA1E959 279 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 MEGF11A6BM72 1044 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 SIRPB1O00241 398 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 RGS10O43665 173 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 CALCBP10092 127 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF44P15621 663 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 PAX6P26367 422 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 KIR2DS4P43632 304 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 GLIPR1P48060 266 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 EFNB2P52799 333 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 EDDM3AQ14507 147 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 IRF3Q14653 427 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 OR52W1Q6IF63 320 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 UNQ9370/PRO34162Q6UXP9 181 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF782Q6ZMW2 699 aaPredicted RBP10.04□□□□□ -0.8
PRKDC-207ENST00000536483 AHSA2Q719I0 299 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 LINC00596Q86U02 117 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 CLVS1Q8IUQ0 354 aaPredicted RBP10.04□□□□□ -0.8
PRKDC-207ENST00000536483 MS4A15Q8N5U1 240 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms