RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 YIPF5Q969M3 257 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 NEURL3Q96EH8 262 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 SLC35E1Q96K37 410 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 C4orf36Q96KX1 117 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF607Q96SK3 696 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF382Q96SR6 550 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 MCHR1Q99705 422 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CHIAQ9BZP6 476 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 GLIPR2Q9H4G4 154 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ARMC7Q9H6L4 198 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 RANBP3Q9H6Z4 567 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 ELOVL3Q9HB03 270 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 NOX3Q9HBY0 568 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 EXD2Q9NVH0 621 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 PAK1IP1Q9NWT1 392 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 RPUSD1Q9UJJ7 312 aaKnown RBP2.33□□□□□ -2.04
SNHG1-202ENST00000535689 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 POFUT2Q9Y2G5 429 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 CDH10Q9Y6N8 788 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
SNHG1-202ENST00000535689 IGLV3-9A0A075B6K5 115 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TMED7-TICAM2A0A0A6YYA0 188 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF726A6NNF4 738 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TRDCB7Z8K6 153 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 H0Y8G0 127 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 H3BSA7 217 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 UBXN8O00124 270 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 DNALI1O14645 258 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 LSM1O15116 133 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 EIF3HO15372 352 aaKnown RBP eCLIP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 LANCL1O43813 399 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 SCN2BO60939 215 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 KLHL2O95198 593 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 PSMG1O95456 288 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 LGI1O95970 557 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 PAHP00439 452 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ALDOBP05062 364 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 PNMTP11086 282 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TAC1P20366 129 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 COX7A1P24310 79 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 APLNRP35414 380 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 POLR2HP52434 150 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 PKNOX1P55347 436 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 COPZ1P61923 177 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 EWSR1Q01844 656 aaKnown RBP eCLIP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 FGL1Q08830 312 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 NAB1Q13506 487 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 C1DQ13901 141 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR4D1Q15615 310 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 IMPG1Q17R60 797 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 MICBQ29980 383 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TBC1D28Q2M2D7 210 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 C9orf129Q5T035 196 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TTC23Q5W5X9 447 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ACOT7LQ6ZUV0 252 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 MDP1Q86V88 176 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ERI1Q8IV48 349 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 FTMTQ8N4E7 242 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR9K2Q8NGE7 335 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR8B3Q8NGG8 313 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR51S1Q8NGJ8 323 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR52M1Q8NGK5 317 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 PYROXD1Q8WU10 500 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 EMG1Q92979 244 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ZIM3Q96PE6 472 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 MS4A4EQ96PG1 132 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 OR8B2Q96RD0 313 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 GPR22Q99680 433 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 NRIP2Q9BQI9 281 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 MAGT1Q9H0U3 335 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 REEP4Q9H6H4 257 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 GORASP2Q9H8Y8 452 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 ANKRA2Q9H9E1 313 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 RRAGDQ9NQL2 400 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 CTPS2Q9NRF8 586 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 B3GNT2Q9NY97 397 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 CLN8Q9UBY8 286 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 RPL36Q9Y3U8 105 aaKnown RBP2.32□□□□□ -2.04
SNHG1-202ENST00000535689 TENM2Q9NT68 2774 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 SORL1Q92673 2214 aa2.32□□□□□ -2.04
SNHG1-202ENST00000535689 RYR3Q15413 4870 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TRAV40A0A0B4J280 105 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 LOC102725191A0A1B0GVB3 256 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 FAM240BA0A1B0GVZ2 78 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 RBMY1BA6NDE4 496 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 RBMY1EA6NEQ0 496 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 K7EIL1 84 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 FAAHO00519 579 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 PHYHO14832 338 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SNAP29O95721 258 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 IGKV1D-16P01601 117 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 HMGN2P05204 90 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TFPTP0C1Z6 253 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 RBMY1DP0C7P1 496 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 OR8G3PP0DMU2 310 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 NR2C1P13056 603 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms