RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 VCX3AQ9NNX9 186 aa17.89■□□□□ 0.45
SSPN-204ENST00000535504 POMT1Q9Y6A1 747 aa17.89■□□□□ 0.45
SSPN-204ENST00000535504 SESN1Q9Y6P5 492 aa17.89■□□□□ 0.45
SSPN-204ENST00000535504 SVEP1Q4LDE5 3571 aa17.89■□□□□ 0.45
SSPN-204ENST00000535504 MEIKINA0A087WXM9 373 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 A0A0U1RQK1 487 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 MDFIC2A0A1B0GVS7 189 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 PDCD5O14737 125 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 GEMIN2O14893 280 aaKnown RBP17.88■□□□□ 0.45
SSPN-204ENST00000535504 HOXA3O43365 443 aaPredicted RBP17.88■□□□□ 0.45
SSPN-204ENST00000535504 SC5DO75845 299 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 IGHV1-8P0DP01 117 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 CALRP27797 417 aaKnown RBP17.88■□□□□ 0.45
SSPN-204ENST00000535504 HTR2CP28335 458 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 SAA4P35542 130 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 PRB3Q04118 309 aaPredicted RBP17.88■□□□□ 0.45
SSPN-204ENST00000535504 SPARTQ8N0X7 666 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 PNKDQ8N490 385 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 SELENOIQ9C0D9 397 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 PRDM13Q9H4Q3 707 aa17.88■□□□□ 0.45
SSPN-204ENST00000535504 MEX3AA1L020 520 aaKnown RBP17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A10PA6NDY2 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A18PA6NE21 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A16PA6NEW6 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A20PA6NIJ5 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A8PA6NJQ4 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A7PA6NKC0 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A22PA8MWA6 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A12PA8MX19 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A5PA8MXJ8 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A23PA8MXZ1 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 MCRIP1C9JLW8 97 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 RNASE1P07998 156 aaKnown RBP17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A15PP0C7V4 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A13PP0C7W8 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A14PP0C7W9 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 FAM90A24PP0C7X0 464 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 MGMTP16455 207 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 GLP1RP43220 463 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 GLIPR1P48060 266 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 DYNC1I2Q13409 638 aaKnown RBP17.87■□□□□ 0.45
SSPN-204ENST00000535504 SLC9A3R2Q15599 337 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 TAF9Q16594 264 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 KCTD21Q4G0X4 260 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 UBE2UQ5VVX9 321 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.87■□□□□ 0.45
SSPN-204ENST00000535504 SUMF2Q8NBJ7 301 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 OR6M1Q8NGM8 313 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 ESM1Q9NQ30 184 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 NDUFB11Q9NX14 153 aa17.87■□□□□ 0.45
SSPN-204ENST00000535504 TRAV24A0A0B4J272 114 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 ZNF729A6NN14 1252 aaPredicted RBP17.86■□□□□ 0.45
SSPN-204ENST00000535504 ARG1P05089 322 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 MELTFP08582 738 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 DLX1P56177 255 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 TUSC1Q2TAM9 212 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 LRRTM1Q86UE6 522 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 KCNG3Q8TAE7 436 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 CORO2AQ92828 525 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 NCOR1P1Q9H4R4 102 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 BANF2Q9H503 90 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 RAB9BQ9NP90 201 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 TNFRSF19Q9NS68 423 aa17.86■□□□□ 0.45
SSPN-204ENST00000535504 SOX21Q9Y651 276 aaPredicted RBP17.86■□□□□ 0.45
SSPN-204ENST00000535504 TMEM30CPA0ZSE6 113 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 COL6A5A8TX70 2615 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 GALP22466 123 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 DLX6P56179 175 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 FABP5Q01469 135 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 C16orf87Q6PH81 154 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 C12orf54Q6X4T0 127 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 TMEM91Q6ZNR0 172 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 LDLRAD3Q86YD5 345 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 DSCAML1Q8TD84 2053 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 TMEM59Q9BXS4 323 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 KIF25Q9UIL4 384 aa17.85■□□□□ 0.45
SSPN-204ENST00000535504 TBL2Q9Y4P3 447 aaKnown RBP17.85■□□□□ 0.45
SSPN-204ENST00000535504 A0A1W2PP11 408 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 TNFAIP8O95379 198 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 BPNT1O95861 308 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 MPIG6BO95866 241 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 RAB11BQ15907 218 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 C1orf100Q5SVJ3 147 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 HEPN1Q6WQI6 88 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 RTN4RL2Q86UN3 420 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 OR5R1Q8NH85 324 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 FAM46BQ96A09 425 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 COQ2Q96H96 371 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 NEDD4LQ96PU5 975 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 CLEC7AQ9BXN2 247 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 TMEM133Q9H2Q1 129 aa17.84■□□□□ 0.45
SSPN-204ENST00000535504 TRDV1A0A1B0GX56 115 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 ARSBP15848 533 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 CDK2P24941 298 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 PAX5Q02548 391 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 SSX1Q16384 188 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 SLC35E4Q6ICL7 350 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 TCF23Q7RTU1 214 aa17.83■□□□□ 0.44
SSPN-204ENST00000535504 C11orf42Q8N5U0 333 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms