RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TTC3P53804 2025 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 PRSS1P07477 247 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 PNLIPP16233 465 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 RAG2P55895 527 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 SURF2Q15527 256 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 CLLU1Q5K131 121 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 DHRS11Q6UWP2 260 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 WFDC3Q8IUB2 231 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 ZNF764Q96H86 408 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 LINC00052Q96N35 136 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 UCN2Q96RP3 112 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 PCGF1Q9BSM1 259 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 PIPOXQ9P0Z9 390 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 NPAS1Q99742 590 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 MS4A7Q9GZW8 240 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 MVDP53602 400 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 PSG5Q15238 335 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 CCDC144NLQ6NUI1 221 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 CLRN3Q8NCR9 226 aa15.96■□□□□ 0.15
SFSWAP-203ENST00000535236 SSX8Q7RTT4 187 aa15.96■□□□□ 0.14
SFSWAP-203ENST00000535236 FAM219AQ8IW50 185 aa15.96■□□□□ 0.14
SFSWAP-203ENST00000535236 GAPTQ8N292 157 aa15.96■□□□□ 0.14
SFSWAP-203ENST00000535236 NRTNQ99748 197 aa15.96■□□□□ 0.14
SFSWAP-203ENST00000535236 NXF2Q9GZY0 626 aaKnown RBP15.96■□□□□ 0.14
SFSWAP-203ENST00000535236 SOCS1O15524 211 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 COX6B1P14854 86 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 KIR2DL1P43626 348 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 ZFP36L2P47974 494 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TSPO2Q5TGU0 170 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 OR10C1Q96KK4 312 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 DUXBA0A1W2PPF3 345 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 ID1P41134 155 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 P2RY1P47900 373 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 OR4P4Q8NGL7 312 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TTTY12Q9BZ98 90 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 ZP3P21754 424 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 C21orf58P58505 322 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 MPV17LQ2QL34 196 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 DMKNQ6E0U4 476 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TRBV23-1A0A0A0MS06 115 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TCRBV16S1A1N1A0A5B0 115 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 TMEM33P57088 247 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 AP5S1Q9NUS5 200 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 CYB5R1Q9UHQ9 305 aa15.95■□□□□ 0.14
SFSWAP-203ENST00000535236 HRKO00198 91 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 MMDQ15546 238 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 TCTEX1D1Q8N7M0 179 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 LSMEM1Q8N8F7 131 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 OR5A2Q8NGI9 324 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 PPIAL4EA0A075B759 164 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 PPIAL4DF5H284 164 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 SPINT1O43278 529 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 MBPP02686 304 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 HPXP02790 462 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 CSN3P07498 182 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 MGPP08493 103 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 PPIAL4FP0DN26 164 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 G6PCP35575 357 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 HLA-DRB3P79483 266 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 C10orf113Q5VZT2 155 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 FAHD2BQ6P2I3 314 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 MDP1Q86V88 176 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 FAHD2AQ96GK7 314 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 CCL28Q9NRJ3 127 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 FRRS1LQ9P0K9 344 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 PPIAL4AQ9Y536 164 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 IGSF23A1L1A6 192 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 P01737 135 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 LYRM7Q5U5X0 104 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 XAF1Q6GPH4 301 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 OR4X1Q8NH49 305 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 RPS4Y2Q8TD47 263 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 MSL2Q9HCI7 577 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 SLC25A10Q9UBX3 287 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 DOCK2Q92608 1830 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 HERVK_113P61574 105 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 ISXQ2M1V0 245 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 SSMEM1Q8WWF3 244 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 C12orf57Q99622 126 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 SRD5A3Q9H8P0 318 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 CHST1O43916 411 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 ADAP1O75689 374 aa15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 HIST1H1EP10412 219 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-203ENST00000535236 GLI3P10071 1580 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 FGF11Q92914 225 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 GSX1Q9H4S2 264 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 COL22A1Q8NFW1 1626 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 APELAP0DMC3 54 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 CLEC2AQ6UVW9 174 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 FAM210BQ96KR6 192 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 SHROOM3Q8TF72 1996 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 STPG1Q5TH74 334 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 LINC00596Q86U02 117 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 MS4A10Q96PG2 267 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 LYRM2Q9NU23 88 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 NAT8Q9UHE5 227 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 OGG1O15527 345 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 PPYP01298 95 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms