RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 PPA2Q9H2U2 334 aa12.55□□□□□ -0.4
UBXN1-217ENST00000534176 FBLN5Q9UBX5 448 aa12.55□□□□□ -0.4
UBXN1-217ENST00000534176 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
UBXN1-217ENST00000534176 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 LALBAP00709 142 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 OMGP23515 440 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 HTR1DP28221 377 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 CD34P28906 385 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 PRRX1P54821 245 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 DLX1P56177 255 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 RELBQ01201 579 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 AESQ08117 197 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 ANKRD60Q9BZ19 345 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 BLOC1S6Q9UL45 172 aa12.54□□□□□ -0.4
UBXN1-217ENST00000534176 SIRT4Q9Y6E7 314 aaPredicted RBP12.54□□□□□ -0.4
UBXN1-217ENST00000534176 A0A087X0M5 115 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 TRBV5-7A0A0A0MS05 114 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 A0A1B0GX30 115 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A10PA6NDY2 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A18PA6NE21 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A16PA6NEW6 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A20PA6NIJ5 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A7PA6NKC0 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A22PA8MWA6 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A12PA8MX19 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A5PA8MXJ8 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A23PA8MXZ1 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 OOSP1A8MZH6 123 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 HTR3BO95264 441 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A15PP0C7V4 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A13PP0C7W8 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A14PP0C7W9 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 FAM90A24PP0C7X0 464 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 GZMHP20718 246 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 MYF6P23409 242 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 CDK2P24941 298 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 PSMA1P25786 263 aaKnown RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 BRS3P32247 399 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 RBM11P57052 281 aaKnown RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 PRB3Q04118 309 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 SPHARQ15513 63 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 TRAM1Q15629 374 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 LAIR2Q6ISS4 152 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 BRICD5Q6PL45 260 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 TPRX1Q8N7U7 411 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 DERL3Q96Q80 235 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 NR1H4Q96RI1 486 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
UBXN1-217ENST00000534176 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
UBXN1-217ENST00000534176 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 PTGES3LE9PB15 166 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 TOR1AO14656 332 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 CA11O75493 328 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.41
UBXN1-217ENST00000534176 GLAP06280 429 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 UBBP0CG47 229 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 CALCBP10092 127 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 GABRA5P31644 462 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 OR3A4PP47883 348 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 GLIPR1P48060 266 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 AQP4P55087 323 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 SLC35A2P78381 396 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
UBXN1-217ENST00000534176 SSX2Q16385 188 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 SLC35E4Q6ICL7 350 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 Q6ZSV7 163 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 JAGN1Q8N5M9 183 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 CITED1Q99966 193 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 TCF7L1Q9HCS4 588 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 ISYNA1Q9NPH2 558 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 TCF19Q9Y242 345 aa12.52□□□□□ -0.41
UBXN1-217ENST00000534176 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 TRAV24A0A0B4J272 114 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 ERICH4A6NGS2 130 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 M0QZ24 198 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 F2RL2O00254 374 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 PROK1P58294 105 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 FAM189A2Q15884 450 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 COQ2Q96H96 371 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 DPCDQ9BVM2 203 aaPredicted RBP12.51□□□□□ -0.41
UBXN1-217ENST00000534176 CST11Q9H112 138 aa12.51□□□□□ -0.41
UBXN1-217ENST00000534176 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
UBXN1-217ENST00000534176 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms