RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 RPS15AP62244 130 aaKnown RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 GPNMBQ14956 572 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 GABRA6Q16445 453 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 KCTD19Q17RG1 926 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 SPIN3Q5JUX0 258 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 STAC2Q6ZMT1 411 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 AHSA2Q719I0 299 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 SYS1Q8N2H4 156 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 OR2L13Q8N349 312 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 JAGN1Q8N5M9 183 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 PIGXQ8TBF5 258 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 TFB1MQ8WVM0 346 aaKnown RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 TFGQ92734 400 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 SMARCD2Q92925 531 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 UCN3Q969E3 161 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 TOMM40LQ969M1 308 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 ATXN7L3BQ96GX2 97 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 OR2M4Q96R27 311 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 OR52E6Q96RD3 313 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 NIPSNAP3BQ9BS92 247 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 SEC11CQ9BY50 192 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 ACTR3CQ9C0K3 210 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 WDR54Q9H977 334 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 RETNQ9HD89 108 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 MEPEQ9NQ76 525 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 NXT1Q9UKK6 140 aaKnown RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 OARD1Q9Y530 152 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 ASTN1O14525 1302 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 RLFQ13129 1914 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 IGKV3D-15A0A087WSY6 115 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 MEIKINA0A087WXM9 373 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TRAV39A0A0B4J263 110 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 C9J4A7 227 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RNASEK-C17orf49H0YIS7 233 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RAMP1O60894 148 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 SLC25A27O95847 323 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ALDOBP05062 364 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ARG1P05089 322 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 DCNP07585 359 aaKnown RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RPS12P25398 132 aaKnown RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FASP25445 335 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 BRS3P32247 399 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GLP1RP43220 463 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GPR1P46091 355 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RAB8AP61006 207 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OR5I1Q13606 314 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 JOSD1Q15040 202 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 UTF1Q5T230 341 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FAM219BQ5XKK7 198 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GLYATQ6IB77 296 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 UNQ9370/PRO34162Q6UXP9 181 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TMPRSS11AQ6ZMR5 421 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 CEACAM19Q7Z692 300 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OAFQ86UD1 273 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 IFNEQ86WN2 208 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 APRG1Q8IVJ8 170 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 CMTM1Q8IZ96 169 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 SLC34A3Q8N130 599 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 BPIFB2Q8N4F0 458 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 C11orf42Q8N5U0 333 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF491Q8N8L2 437 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 BEST4Q8NFU0 473 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OR9A4Q8NGU2 314 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RNASEH2CQ8TDP1 164 aaKnown RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 HIST1H2BAQ96A08 127 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ROPN1LQ96C74 230 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 MS4A4EQ96PG1 132 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ULBP2Q9BZM5 246 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 C20orf85Q9H1P6 137 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 NECAP2Q9NVZ3 263 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 PLEKHJ1Q9NW61 149 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 COMMD3Q9UBI1 195 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FANCMQ8IYD8 2048 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TANC1Q9C0D5 1861 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM269A0A1B0GVZ9 245 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OR5H14A6NHG9 310 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 VSTM2BA6NLU5 285 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF726A6NNF4 738 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ANKRD63C9JTQ0 380 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 INMT-MINDY4F8WBC2 141 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 H7C423 109 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 K7EQG2 157 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 M0R036 132 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 PPP1R2P9O14990 202 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 NUDT14O95848 222 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 CD160O95971 181 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 MT-CO2P00403 227 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GCGP01275 180 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 IGHG4P01861 327 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GKN3PP0CG01 181 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 MGMTP16455 207 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 GGT1P19440 569 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ACVR1BP36896 505 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 CSNK1A1P48729 337 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TTPAP49638 278 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 NUDT2P50583 147 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms