RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 P2RX4Q99571 388 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 AP4S1Q9Y587 144 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 CCR9P51686 369 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 KCTD20Q7Z5Y7 419 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 CHST4Q8NCG5 386 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 OR51T1Q8NGJ9 327 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 OR13C3Q8NGS6 347 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 RFKQ969G6 155 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 TOMM40LQ969M1 308 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 RPEQ96AT9 228 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 WWC2-AS2Q96NR7 200 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 DUX3Q96PT4 197 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 NEK6Q9HC98 313 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 KIF25Q9UIL4 384 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 PSG11Q9UQ72 335 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 MYRFQ9Y2G1 1151 aa14.24□□□□□ -0.13
UBXN1-216ENST00000533908 TRAV24A0A0B4J272 114 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 HSPB6O14558 160 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 SLC16A6O15403 523 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 TMEM225BP0DP42 221 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 RFESDQ8TAC1 157 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 RNFT2Q96EX2 444 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 PELI1Q96FA3 418 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 OSBPL10Q9BXB5 764 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 ZCCHC4Q9H5U6 513 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 LINC00574Q9H8X3 128 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 RHOFQ9HBH0 211 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 CALYQ9NYX4 217 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 OR6C3Q9NZP0 311 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 AASSQ9UDR5 926 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 ENOPH1Q9UHY7 261 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 OAZ3Q9UMX2 235 aa14.23□□□□□ -0.13
UBXN1-216ENST00000533908 TRAV39A0A0B4J263 110 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 DAPL1A0PJW8 107 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 NPIPB11E5RHQ5 1161 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 E9PQ18 207 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 H0YJX3 145 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 J3QLW9 94 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 HTR1AP08908 422 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 OCM2P0CE71 109 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 OCMP0CE72 109 aaPredicted RBP14.22□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF19P17023 458 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 MYCNOSP40205 109 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 KISS1Q15726 138 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 LTC4SQ16873 150 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 OR51D1Q8NGF3 324 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 PLPPR1Q8TBJ4 325 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 NR1H4Q96RI1 486 aaPredicted RBP14.22□□□□□ -0.13
UBXN1-216ENST00000533908 IDI2-AS1Q9NZ38 188 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF581Q9P0T4 197 aa14.22□□□□□ -0.13
UBXN1-216ENST00000533908 MEIKINA0A087WXM9 373 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 A0A1W2PPE3 182 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 SERPINE3A8MV23 424 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 TMEM11P17152 192 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 GLP1RP43220 463 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 ALKBH1Q13686 389 aaKnown RBP14.21□□□□□ -0.13
UBXN1-216ENST00000533908 HES1Q14469 280 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF565Q8N9K5 539 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 DPF1Q92782 380 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 NCOR1P1Q9H4R4 102 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 ZFP57Q9NU63 452 aa14.21□□□□□ -0.13
UBXN1-216ENST00000533908 SAC3D1A6NKF1 404 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 NUDT19A8MXV4 375 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 E9PI62 339 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 IL1AP01583 271 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 IGKV1D-33P01593 117 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 IGKV1-33P01594 117 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 IGHG2P01859 326 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 GNG10P50151 68 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 BNIP1Q12981 228 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 MADCAM1Q13477 382 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 ELP2Q6IA86 826 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 KLHL30-AS1Q8NEE0 82 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 CNIH3Q8TBE1 160 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 MRGPRDQ8TDS7 321 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 TRUB1Q8WWH5 349 aaKnown RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 TFAP2CQ92754 450 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 RBMXL1Q96E39 390 aaKnown RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 RAX2Q96IS3 184 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 MCRIP2Q9BUT9 160 aaKnown RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 ISG20L2Q9H9L3 353 aaKnown RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 PCDHB16Q9NRJ7 776 aa14.2□□□□□ -0.14
UBXN1-216ENST00000533908 EXOGQ9Y2C4 368 aaKnown RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 AMMECR1Q9Y4X0 333 aaPredicted RBP14.2□□□□□ -0.14
UBXN1-216ENST00000533908 H0YHG0 523 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 FGF16O43320 207 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 HCKP08631 526 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 DBTP11182 482 aaKnown RBP14.19□□□□□ -0.14
UBXN1-216ENST00000533908 MTNR1BP49286 362 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 EBI3Q14213 229 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 ZSCAN26Q16670 478 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 PAN3Q58A45 887 aaKnown RBP14.19□□□□□ -0.14
UBXN1-216ENST00000533908 SLC25A30Q5SVS4 291 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 ZNF691Q5VV52 312 aa14.19□□□□□ -0.14
UBXN1-216ENST00000533908 FAM53AQ6NSI3 398 aaPredicted RBP14.19□□□□□ -0.14
UBXN1-216ENST00000533908 LCNL1Q6ZST4 164 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms