RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZNF728P0DKX0 622 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF19P17023 458 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 PRDX2P32119 198 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 SOX6P35712 828 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 OSR2Q8N2R0 312 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF511Q8NB15 262 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 OR4M1Q8NGD0 313 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 OR5A2Q8NGI9 324 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 OTOSQ8NHW6 89 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 C4orf36Q96KX1 117 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 INTS14Q96SY0 518 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 PLGRKTQ9HBL7 147 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 POLDIP2Q9Y2S7 368 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 LSM4Q9Y4Z0 139 aaKnown RBP9.91□□□□□ -0.82
CAPN1-223ENST00000533079 HILPDAQ9Y5L2 63 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 LCE6AA0A183 80 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 SELENOFO60613 162 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-223ENST00000533079 SC5DO75845 299 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 OR2F2O95006 317 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 LPLP06858 475 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 MAP2K3P46734 347 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 RORCP51449 518 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 PSMA6P60900 246 aaKnown RBP9.9□□□□□ -0.82
CAPN1-223ENST00000533079 RPS25P62851 125 aaKnown RBP9.9□□□□□ -0.82
CAPN1-223ENST00000533079 FABP5Q01469 135 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 ROM1Q03395 351 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 FDX2Q6P4F2 183 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 HAGHLQ6PII5 290 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-223ENST00000533079 DEGS2Q6QHC5 323 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 SSX6Q7RTT6 188 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 OR6N2Q8NGY6 317 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 PELI1Q96FA3 418 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 OR8B4Q96RC9 309 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 NIPAL2Q9H841 368 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 PALMDQ9NP74 551 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 BRD7Q9NPI1 651 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 COPS3Q9UNS2 423 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 SIRT4Q9Y6E7 314 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-223ENST00000533079 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
CAPN1-223ENST00000533079 IGHV2-26A0A0B4J1V2 119 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 E9PI62 339 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 TMEM127O75204 238 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 GATBO75879 557 aaKnown RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 CHATP28329 748 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 BRS3P32247 399 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 RPS19P39019 145 aaKnown RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 MYCNOSP40205 109 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 HCCSP53701 268 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 RPL23AP62750 156 aaKnown RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 CDK5R1Q15078 307 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 KCTD18Q6PI47 426 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 TMEM91Q6ZNR0 172 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 MCFD2Q8NI22 146 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 SMIM19Q96E16 107 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 LYZL4Q96KX0 146 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 PGLYRP3Q96LB9 341 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF714Q96N38 554 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 TBX5Q99593 518 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 LYSTQ99698 3801 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 EXOSC4Q9NPD3 245 aaKnown RBP9.89□□□□□ -0.83
CAPN1-223ENST00000533079 ZFP57Q9NU63 452 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 LAMP5Q9UJQ1 280 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 PEX16Q9Y5Y5 336 aa9.89□□□□□ -0.83
CAPN1-223ENST00000533079 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 A0A0U1RQV5 110 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 PSMB11A5LHX3 300 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 J3QT63 122 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 K7N7A8 449 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 GABRPO00591 440 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF254O75437 659 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 NXPH2O95156 264 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 KRT8P05787 483 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 HTR1DP28221 377 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 ETV6P41212 452 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 MTNR1BP49286 362 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 CCR9P51686 369 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 MEF2CQ06413 473 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF846Q147U1 533 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 DMRTC1Q5HYR2 192 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 CEP78Q5JTW2 689 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 FAM220AQ7Z4H9 259 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 TPRA1Q86W33 373 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF573Q86YE8 665 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 GHSRQ92847 366 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 BORCS5Q969J3 196 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 TMEM203Q969S6 136 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-223ENST00000533079 RBM14Q96PK6 669 aaKnown RBP9.88□□□□□ -0.83
CAPN1-223ENST00000533079 P2RX4Q99571 388 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 NRIP2Q9BQI9 281 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 CLEC7AQ9BXN2 247 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 WDR12Q9GZL7 423 aaKnown RBP9.88□□□□□ -0.83
CAPN1-223ENST00000533079 RNF167Q9H6Y7 350 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms