RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ZNF691Q5VV52 312 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
PCF11-206ENST00000533018 MEIKINA0A087WXM9 373 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 KBTBD11-OT1A0A1B0GTJ5 212 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 E9PI62 339 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 IGHV3-7P01780 117 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 FAM106CPP0CH98 169 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 IGLL1P15814 213 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 RAB3AP20336 220 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 CD34P28906 385 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 RSU1Q15404 277 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 ZSCAN26Q16670 478 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 LTC4SQ16873 150 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 C17orf58Q2M2W7 97 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 PARP16Q8N5Y8 322 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 OR4X2Q8NGF9 303 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 TNFAIP8L1Q8WVP5 186 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 RPEQ96AT9 228 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 CPNE2Q96FN4 548 aaPredicted RBP14.22□□□□□ -0.13
PCF11-206ENST00000533018 C9orf16Q9BUW7 83 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 BARHL1Q9BZE3 327 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 INPP5EQ9NRR6 644 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 ERVK13-1Q9NX77 482 aa14.22□□□□□ -0.13
PCF11-206ENST00000533018 TSSC4Q9Y5U2 329 aaPredicted RBP14.22□□□□□ -0.13
PCF11-206ENST00000533018 ALX3O95076 343 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 GABRB1P18505 474 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 C21orf33P30042 268 aaPredicted RBP14.21□□□□□ -0.13
PCF11-206ENST00000533018 SOX2P48431 317 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 LOXL3P58215 753 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 RAB40BQ12829 278 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 MRPL28Q13084 256 aaKnown RBP14.21□□□□□ -0.13
PCF11-206ENST00000533018 UTF1Q5T230 341 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 FOXB2Q5VYV0 432 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 OR9G1Q8NH87 305 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 RHOXF1Q8NHV9 184 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 CNIH3Q8TBE1 160 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 LEAP2Q969E1 77 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 MYDGFQ969H8 173 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 TOMM40LQ969M1 308 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 KIRREL1Q96J84 757 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 AURKAIP1Q9NWT8 199 aaPredicted RBP14.21□□□□□ -0.13
PCF11-206ENST00000533018 CALYQ9NYX4 217 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 KIF25Q9UIL4 384 aa14.21□□□□□ -0.13
PCF11-206ENST00000533018 RPL36Q9Y3U8 105 aaKnown RBP14.21□□□□□ -0.13
PCF11-206ENST00000533018 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
PCF11-206ENST00000533018 DNAH3Q8TD57 4116 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 A0A087X0M5 115 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 A0A1B0GX30 115 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 E9PQ18 207 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 M0QZK8 103 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 GTF2A1P52655 376 aaPredicted RBP14.2□□□□□ -0.14
PCF11-206ENST00000533018 HES1Q14469 280 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 KLHL22Q53GT1 634 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 C10orf67Q8IYJ2 551 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 OR51T1Q8NGJ9 327 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 OR52I1Q8NGK6 324 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 OR13A1Q8NGR1 328 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 OR10K1Q8NGX5 313 aa14.2□□□□□ -0.14
PCF11-206ENST00000533018 TRAV24A0A0B4J272 114 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 LOC100130705A0A1B0GUX0 176 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 OOSP1A8MZH6 123 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 LY6LH3BQJ8 138 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 GABRPO00591 440 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 HTR3BO95264 441 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 GNG10P50151 68 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 PIGYQ3MUY2 71 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 TCTEX1D4Q5JR98 221 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 ELP2Q6IA86 826 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 PXT1Q8NFP0 134 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 MRGPRDQ8TDS7 321 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 SLC29A1Q99808 456 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 PCDHB16Q9NRJ7 776 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 TAS2R4Q9NYW5 299 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 IDI2-AS1Q9NZ38 188 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 ING4Q9UNL4 249 aa14.19□□□□□ -0.14
PCF11-206ENST00000533018 J3QR06 171 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 CLIC3O95833 236 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 AMY1AP04745 511 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 AMY2AP04746 511 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 CD2P06729 351 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 SNRNP70P08621 437 aaKnown RBP14.18□□□□□ -0.14
PCF11-206ENST00000533018 SLC35A2P78381 396 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 WFDC9Q8NEX5 89 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 OR51A2Q8NGJ7 313 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 OR56B4Q8NH76 319 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 HAVCR2Q8TDQ0 301 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 GPR148Q8TDV2 347 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 S100A13Q99584 98 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 ZNF649Q9BS31 505 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 JAM3Q9BX67 310 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 MOB4Q9Y3A3 225 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 HSPE1-MOB4S4R3N1 261 aa14.18□□□□□ -0.14
PCF11-206ENST00000533018 TRAV39A0A0B4J263 110 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 CDRT1O95170 752 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 MPIG6BO95866 241 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 IL1AP01583 271 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 CGB3P0DN86 165 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 CGB7P0DN87 165 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms