RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FUT3P21217 361 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 ERP29P30040 261 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR3A1P47881 315 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 KCNJ3P48549 501 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 DEFA1P59665 94 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 DEFA3P59666 94 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 PAX8Q06710 450 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 UNC119Q13432 240 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 RBM39Q14498 530 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 EDDM3AQ14507 147 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 MZT2AQ6P582 158 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 METAP1DQ6UB28 335 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 Q71RC1 249 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 BPIFB2Q8N4F0 458 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 SUMF2Q8NBJ7 301 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 OR4M1Q8NGD0 313 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 NEK7Q8TDX7 302 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 DPCDQ9BVM2 203 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 TM2D1Q9BX74 207 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 PPA2Q9H2U2 334 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 KCNK15Q9H427 330 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 AUP1Q9Y679 476 aa9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-211ENST00000533012 A0A0B4J203 849 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 hADV38S2A0JD32 116 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 METTL21EPA6NDL7 271 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 CSN2P05814 226 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 GLAP06280 429 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 RAB6AP20340 208 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 ETV6P41212 452 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 P2RX3P56373 397 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 SCAND1P57086 179 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 ARF6P62330 175 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 MEF2CQ06413 473 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 AESQ08117 197 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 CR1LQ2VPA4 569 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 TRIM16LQ309B1 348 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 KRBOX4Q5JUW0 171 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM200BQ69YZ2 307 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 RAB12Q6IQ22 244 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 FAM89BQ8N5H3 189 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 TEX29Q8N6K0 151 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 C8orf46Q8TAG6 207 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 ACOT12Q8WYK0 555 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 PTX4Q96A99 478 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 SLC25A46Q96AG3 418 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 DACT3Q96B18 629 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 NEDD4LQ96PU5 975 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 CCDC32Q9BV29 185 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 LPAR5Q9H1C0 372 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 TMEM160Q9NX00 188 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 RCC2Q9P258 522 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
TRAPPC4-211ENST00000533012 hCG_1809904A0A1W2PP81 198 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 A0A1W2PPE2 198 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 A0A1W2PR64 198 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 A0A1W2PRV1 198 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 PFDN1O60925 122 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 PDCD6O75340 191 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 SNRPBP14678 240 aaKnown RBP9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 HNF1AP20823 631 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 VEGFCP49767 419 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 ATXN7L3Q14CW9 347 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 METTL11BQ5VVY1 283 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 SIGIRRQ6IA17 410 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 TPRX1Q8N7U7 411 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 OR56B1Q8NGI3 324 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 CHPT1Q8WUD6 406 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 WDFY2Q96P53 400 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 NICN1Q9BSH3 213 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 TMPRSS13Q9BYE2 586 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 C19orf12Q9NSK7 152 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 PLEKHJ1Q9NW61 149 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 ING3Q9NXR8 418 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 ZNF581Q9P0T4 197 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 ONECUT1Q9UBC0 465 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 ETV7Q9Y603 341 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 KPTNQ9Y664 436 aa9.27□□□□□ -0.93
TRAPPC4-211ENST00000533012 CR1P17927 2039 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 MEIKINA0A087WXM9 373 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 TRGV10A0A0A0MS01 117 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 A0A0A6YYD4 124 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 SOCS1O15524 211 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 RGS5O15539 181 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 CA11O75493 328 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 TOX4O94842 621 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 PAHP00439 452 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 APOA1P02647 267 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 PTBP1P26599 531 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 GLIPR1P48060 266 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 EFNB2P52799 333 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 PAX5Q02548 391 aa9.26□□□□□ -0.93
TRAPPC4-211ENST00000533012 FAM120AOSQ5T036 256 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms