RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	DOLPP1	Q86YN1	238 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	MOB3A	Q96BX8	217 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FAM206A	Q9NX38	181 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FNDC7	Q5VTL7	733 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	KLHDC3	Q9BQ90	382 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TUBG2	Q9NRH3	451 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SLC39A9	Q9NUM3	307 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	MTFP1	Q9UDX5	166 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	IGLV3-32	A0A0A0MS00	114 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	EFNA2	O43921	213 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	EFNB2	P52799	333 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ARF6	P62330	175 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	OR10P1	Q8NGE3	313 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	STRAP	Q9Y3F4	350 aa	Known RBP	13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FAM208B	Q5VWN6	2430 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RBM11	P57052	281 aa	Known RBP	13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SSBP1	Q04837	148 aa	Known RBP	13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ABLIM2	Q6H8Q1	611 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ANXA10	Q9UJ72	324 aa		13.55	□□□□□ -0.24
PPFIA1-222	ENST00000532504	NPIPB13	A6NJU9	1138 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	NPIPB4	C9JG80	1138 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SS18L1	O75177	396 aa	Predicted RBP	13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ADRA2C	P18825	462 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	PPP1CC	P36873	323 aa	Known RBP	13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TAS2R30	P59541	319 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TNXA	Q16473	311 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	PSENEN	Q9NZ42	101 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CLPS	P04118	112 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TDGF1	P13385	188 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	IRF3	Q14653	427 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SIRT7	Q9NRC8	400 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	HIF1AN	Q9NWT6	349 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ARG1	P05089	322 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZBTB37	Q5TC79	503 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	IL34	Q6ZMJ4	242 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	LYG2	Q86SG7	212 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	MISP3	Q96FF7	219 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZNF714	Q96N38	554 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504		M0QZ24	198 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	MST1	P26927	711 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	HTR2B	P41595	481 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RAB4B	P61018	213 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CMTM3	Q96MX0	182 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ABHD1	Q96SE0	405 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	BARX1	Q9HBU1	254 aa	Predicted RBP	13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	HES4	Q9HCC6	221 aa		13.54	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZNF266	Q14584	549 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TMEM128	Q5BJH2	165 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ALKAL2	Q6UX46	152 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZNRF4	Q8WWF5	429 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	PARP12	Q9H0J9	701 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	OR2H2	O95918	312 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	AKR1D1	P51857	326 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TMEM65	Q6PI78	240 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CCDC190	Q86UF4	302 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RASL11B	Q9BPW5	248 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RNF122	Q9H9V4	155 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504		A0A0D9SG52	128 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CLEC18A	A5D8T8	446 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	MGST3	O14880	152 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ADRB1	P08588	477 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	APELA	P0DMC3	54 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	GABRB1	P18505	474 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	S100A1	P23297	94 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504		Q56UQ5	140 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FAM201A	Q5SY85	155 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	LINC00114	Q6XXX2	140 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CLEC18C	Q8NCF0	446 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ZNF649	Q9BS31	505 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	IL19	Q9UHD0	177 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	APOC3	P02656	99 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SCGB2A2	Q13296	93 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	ARPC5L	Q9BPX5	153 aa		13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SF3B6	Q9Y3B4	125 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TRIM64C	A6NLI5	447 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SULT1A3	P0DMM9	295 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SULT1A4	P0DMN0	295 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FPR2	P25090	351 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	FOXG1	P55316	489 aa	Predicted RBP	13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TMEM104	Q8NE00	496 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	CRYM-AS1	A6NIL9	109 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	KLF4	O43474	513 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	DFFB	O76075	338 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RBP4	P02753	201 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	SCAND1	P57086	179 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	BTG1	P62324	171 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	BLOC1S1	P78537	153 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	RNFT1	Q5M7Z0	435 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504	TMEM56	Q96MV1	263 aa		13.52	□□□□□ -0.24
PPFIA1-222	ENST00000532504		A0A0A6YYJ9	748 aa		13.52	□□□□□ -0.25
PPFIA1-222	ENST00000532504	IGHV3-72	A0A0B4J1Y9	119 aa		13.52	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PTGDS	P41222	190 aa		13.52	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PKDREJ	Q9NTG1	2253 aa		13.52	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNF716	A6NP11	495 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	RHEB	Q15382	184 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CMTM2	Q8TAZ6	248 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	VOPP1	Q96AW1	172 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNF426	Q9BUY5	554 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms