RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 OR5M8Q8NGP6 311 aa9.87□□□□□ -0.83
PTPRK-221ENST00000532331 OR1K1Q8NGR3 316 aa9.87□□□□□ -0.83
PTPRK-221ENST00000532331 SCN5AQ14524 2016 aa9.87□□□□□ -0.83
PTPRK-221ENST00000532331 DNASE2O00115 360 aaPredicted RBP9.87□□□□□ -0.83
PTPRK-221ENST00000532331 DHRS2Q13268 280 aa9.87□□□□□ -0.83
PTPRK-221ENST00000532331 ADTRPQ96IZ2 230 aa9.87□□□□□ -0.83
PTPRK-221ENST00000532331 A0A1W2PN81 502 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 CHRNA7P36544 502 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 GFRA1P56159 465 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 NAAAQ02083 359 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 ZFP36L1Q07352 338 aaKnown RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 FAM27BQ5VT28 67 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 PRR27Q6MZM9 219 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 CTDSP1Q9GZU7 261 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 TMEM8BA6NDV4 472 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 OOEPA6NGQ2 149 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 DBX1A6NMT0 343 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 CST4P01036 141 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 ERVFRD-1P60508 538 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 TMEM147Q9BVK8 224 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 SEBOXQ9HB31 216 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 BRWD1Q9NSI6 2320 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 LRRC3CA6NJW4 275 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 IFI6P09912 130 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 GZMHP20718 246 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 DEFA6Q01524 100 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 CFHR1Q03591 330 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 SLC38A11Q08AI6 406 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 DOLPP1Q86YN1 238 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 CABLES2Q9BTV7 478 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 INSIG2Q9Y5U4 225 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 PSME4Q14997 1843 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 IGHA1P01876 353 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 C8orf82Q6P1X6 216 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 COL25A1Q9BXS0 654 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 AKIRIN1Q9H9L7 192 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-221ENST00000532331 COA4Q9NYJ1 87 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 ATP6V1G2-DDX39BF2Z307 99 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 SEMA7AO75326 666 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 BCL3P20749 454 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 TBR1Q16650 682 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 GPR137Q96N19 417 aa9.86□□□□□ -0.83
PTPRK-221ENST00000532331 TNXAQ16473 311 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 TGIF2LYQ8IUE0 185 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 TGIF2LXQ8IUE1 241 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 MUC15Q8N387 334 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 MAP6Q96JE9 813 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 SLC52A3Q9NQ40 469 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 SEC14L6B5MCN3 397 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 G3V3Q6 166 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 ICMTO60725 284 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 S100A8P05109 93 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-221ENST00000532331 SLC16A12Q6ZSM3 486 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 OR4F17Q8NGA8 305 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 OR2V2Q96R30 315 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 ZNF703Q9H7S9 590 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-221ENST00000532331 CACNG5Q9UF02 275 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 CENPVL1A0A0U1RR11 272 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 ANKRD20A5PA0PJZ0 165 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 TRDCB7Z8K6 153 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 EFEMP2O95967 443 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 IL11P20809 199 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 RPL31P62899 125 aaKnown RBP9.85□□□□□ -0.83
PTPRK-221ENST00000532331 PSG4Q00888 419 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 PLAC9Q5JTB6 97 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 OR5H1A6NKK0 313 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 IGLV3-21P80748 117 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-221ENST00000532331 GGNBP1Q5YKI7 109 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 COMMD1Q8N668 190 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 OR4S2Q8NH73 311 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 VSTM2AQ8TAG5 236 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 WDR13Q9H1Z4 485 aa9.85□□□□□ -0.83
PTPRK-221ENST00000532331 NTN3O00634 580 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 LANCL1O43813 399 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ARG1P05089 322 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 OR5AC1P0C628 307 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 PERPQ96FX8 193 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 TRIM77I1YAP6 450 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 CDK2AP1O14519 115 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 GYPAP02724 150 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 H3F3AP84243 136 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 IL13RA2Q14627 380 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 FAM209AQ5JX71 171 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ZBTB37Q5TC79 503 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 GAR1Q9NY12 217 aaKnown RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ARID2Q68CP9 1835 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 MIA3Q5JRA6 1907 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 B9A039 149 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 MVDP53602 400 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 RHOFQ9HBH0 211 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 CLCF1Q9UBD9 225 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms