RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LOC107986453A0A1B0GWG9 222 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 A0A1W2PPE3 182 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 FUOMA2VDF0 154 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 TRIM64CA6NLI5 447 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 LEUTXA8MZ59 168 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 TOR1AO14656 332 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 MGST3O14880 152 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 SULT1C4O75897 302 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 HCKP08631 526 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 BCL3P20749 454 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 KIR3DL2P43630 455 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 P2RX3P56373 397 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 NANOS3P60323 173 aaKnown RBP7.01□□□□□ -1.29
USF1-210ENST00000531842 AESQ08117 197 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 HES1Q14469 280 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 LTC4SQ16873 150 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 HLA-DRB5Q30154 266 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 OR52W1Q6IF63 320 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 STPG2Q8N412 459 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 OR5M8Q8NGP6 311 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 RHOXF1Q8NHV9 184 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 ZNF596Q8TC21 504 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 PP6455Q8WZ26 134 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 OR5B12Q96R08 314 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 CHST5Q9GZS9 411 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 GAL3ST2Q9H3Q3 398 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 NEK6Q9HC98 313 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 EXOSC4Q9NPD3 245 aaKnown RBP7.01□□□□□ -1.29
USF1-210ENST00000531842 ENOPH1Q9UHY7 261 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 GSTK1Q9Y2Q3 226 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 UBE2J1Q9Y385 318 aaPredicted RBP7.01□□□□□ -1.29
USF1-210ENST00000531842 SMAD5-AS1Q9Y6J3 95 aa7.01□□□□□ -1.29
USF1-210ENST00000531842 A0A1W2PPI3 338 aa7□□□□□ -1.29
USF1-210ENST00000531842 SH2D1BO14796 132 aa7□□□□□ -1.29
USF1-210ENST00000531842 WBP4O75554 376 aaKnown RBP7□□□□□ -1.29
USF1-210ENST00000531842 UBCP0CG48 685 aaKnown RBP7□□□□□ -1.29
USF1-210ENST00000531842 TMEM11P17152 192 aa7□□□□□ -1.29
USF1-210ENST00000531842 ATF1P18846 271 aa7□□□□□ -1.29
USF1-210ENST00000531842 PRKACBP22694 351 aa7□□□□□ -1.29
USF1-210ENST00000531842 NFYBP25208 207 aa7□□□□□ -1.29
USF1-210ENST00000531842 CDC42P60953 191 aa7□□□□□ -1.29
USF1-210ENST00000531842 ZNF91Q05481 1191 aa7□□□□□ -1.29
USF1-210ENST00000531842 TP53I3Q53FA7 332 aa7□□□□□ -1.29
USF1-210ENST00000531842 SPIN3Q5JUX0 258 aa7□□□□□ -1.29
USF1-210ENST00000531842 SLC35E3Q7Z769 313 aa7□□□□□ -1.29
USF1-210ENST00000531842 RTN4RL2Q86UN3 420 aa7□□□□□ -1.29
USF1-210ENST00000531842 HAPLN4Q86UW8 402 aa7□□□□□ -1.29
USF1-210ENST00000531842 DNAAF1Q8NEP3 725 aa7□□□□□ -1.29
USF1-210ENST00000531842 CHPT1Q8WUD6 406 aa7□□□□□ -1.29
USF1-210ENST00000531842 TRUB1Q8WWH5 349 aaKnown RBP7□□□□□ -1.29
USF1-210ENST00000531842 RFKQ969G6 155 aa7□□□□□ -1.29
USF1-210ENST00000531842 RFT1Q96AA3 541 aa7□□□□□ -1.29
USF1-210ENST00000531842 FGGYQ96C11 551 aa7□□□□□ -1.29
USF1-210ENST00000531842 C10orf35Q96D05 121 aa7□□□□□ -1.29
USF1-210ENST00000531842 LGALS12Q96DT0 336 aa7□□□□□ -1.29
USF1-210ENST00000531842 CITED4Q96RK1 184 aa7□□□□□ -1.29
USF1-210ENST00000531842 PPIL3Q9H2H8 161 aaKnown RBP7□□□□□ -1.29
USF1-210ENST00000531842 AMBNQ9NP70 447 aa7□□□□□ -1.29
USF1-210ENST00000531842 ZFP57Q9NU63 452 aa7□□□□□ -1.29
USF1-210ENST00000531842 FAM118AQ9NWS6 357 aa7□□□□□ -1.29
USF1-210ENST00000531842 EXOGQ9Y2C4 368 aaKnown RBP7□□□□□ -1.29
USF1-210ENST00000531842 MYRFQ9Y2G1 1151 aa7□□□□□ -1.29
USF1-210ENST00000531842 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 TRAV39A0A0B4J263 110 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 TRBV2A0A0J9YWF9 115 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 LOC100130705A0A1B0GUX0 176 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A18PA6NE21 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A16PA6NEW6 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A20PA6NIJ5 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A9PA6NNJ1 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A12PA8MX19 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A5PA8MXJ8 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 SLC16A6O15403 523 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 IGKV1D-33P01593 117 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 IGKV1-33P01594 117 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A15PP0C7V4 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A13PP0C7W8 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A14PP0C7W9 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FAM90A24PP0C7X0 464 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 ZNF44P15621 663 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 SPNP16150 400 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 ERP29P30040 261 aaKnown RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 CEACAM3P40198 252 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 MNDAP41218 407 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 REG1BP48304 166 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 GNG10P50151 68 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 PRRX1P54821 245 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 PDZK1IP1Q13113 114 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 TMED1Q13445 227 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 ZNF146Q15072 292 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 SRSF7Q16629 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
USF1-210ENST00000531842 SMN1Q16637 294 aaKnown RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 C17orf58Q2M2W7 97 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 TMEM244Q5VVB8 128 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 LPCAT4Q643R3 524 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 LAIR2Q6ISS4 152 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 HEPN1Q6WQI6 88 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 LHFPL2Q6ZUX7 228 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 OR4D6Q8NGJ1 314 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms