RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 RIMS4Q9H426 269 aaPredicted RBP13.07□□□□□ -0.32
SC5D-207ENST00000531140 RNF167Q9H6Y7 350 aa13.07□□□□□ -0.32
SC5D-207ENST00000531140 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
SC5D-207ENST00000531140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.07□□□□□ -0.32
SC5D-207ENST00000531140 RPUSD1Q9UJJ7 312 aaKnown RBP13.07□□□□□ -0.32
SC5D-207ENST00000531140 A3GALT2U3KPV4 340 aa13.07□□□□□ -0.32
SC5D-207ENST00000531140 LOC105371242A0A075B767 164 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 TRAV24A0A0B4J272 114 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 IGHV2-70DA0A0C4DH43 119 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 KIR2DS1A0A191URI9 304 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 FAM157AC9JC47 383 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 MCRIP1C9JLW8 97 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 OR3A1P47881 315 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 GMFBP60983 142 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
SC5D-207ENST00000531140 HNRNPA0Q13151 305 aaKnown RBP13.06□□□□□ -0.32
SC5D-207ENST00000531140 MZT2AQ6P582 158 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 ZNRF1Q8ND25 227 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 C19orf18Q8NEA5 215 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 TMEM185AQ8NFB2 350 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
SC5D-207ENST00000531140 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 NARFLQ9H6Q4 476 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
SC5D-207ENST00000531140 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
SC5D-207ENST00000531140 hCG_1809904A0A1W2PP81 198 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 A0A1W2PR64 198 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 A0A1W2PRV1 198 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 hADV38S2A0JD32 116 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 FOXI3A8MTJ6 420 aaPredicted RBP13.05□□□□□ -0.32
SC5D-207ENST00000531140 SERPINE3A8MV23 424 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 M0R1W7 72 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 PSPNO60542 156 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 GABRR1P24046 479 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 GRK1Q15835 563 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 TAF9Q16594 264 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 TMEM30BQ3MIR4 351 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 PAN3Q58A45 887 aaKnown RBP13.05□□□□□ -0.32
SC5D-207ENST00000531140 IDNKQ5T6J7 187 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 SLC35E4Q6ICL7 350 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 TRAT1Q6PIZ9 186 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 CMTM4Q8IZR5 234 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 DYNC2LI1Q8TCX1 351 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 CORO2AQ92828 525 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 FAM46BQ96A09 425 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 NEDD4LQ96PU5 975 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 DPCDQ9BVM2 203 aaPredicted RBP13.05□□□□□ -0.32
SC5D-207ENST00000531140 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
SC5D-207ENST00000531140 OR6C3Q9NZP0 311 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 IL36RNQ9UBH0 155 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 OPN4Q9UHM6 478 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 MGAT4AQ9UM21 535 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 UBE2J1Q9Y385 318 aaPredicted RBP13.05□□□□□ -0.32
SC5D-207ENST00000531140 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 KPTNQ9Y664 436 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 LINC00312Q9Y6C7 94 aa13.05□□□□□ -0.32
SC5D-207ENST00000531140 A0A075B6Q4 140 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 A0A1W2PP11 408 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 TMEM82A0PJX8 343 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 APOA1P02647 267 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 NDUFB7P17568 137 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 CHATP28329 748 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 P2RX3P56373 397 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 CLDN12P56749 244 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
SC5D-207ENST00000531140 UBE2NLQ5JXB2 153 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 SUMF2Q8NBJ7 301 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 ST8SIA4Q92187 359 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 BANF2Q9H503 90 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 RHBDL2Q9NX52 303 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 TAS2R3Q9NYW6 316 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
SC5D-207ENST00000531140 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 RAB27BO00194 218 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 SLC2A2P11168 524 aaPredicted RBP13.03□□□□□ -0.32
SC5D-207ENST00000531140 BPIFB3P59826 476 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 SEC61A1P61619 476 aaKnown RBP13.03□□□□□ -0.32
SC5D-207ENST00000531140 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
SC5D-207ENST00000531140 PAX8Q06710 450 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 SIGIRRQ6IA17 410 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 METAP1DQ6UB28 335 aaPredicted RBP13.03□□□□□ -0.32
SC5D-207ENST00000531140 C12orf54Q6X4T0 127 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 MOB1BQ7L9L4 216 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 ZNF565Q8N9K5 539 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 OR10A7Q8NGE5 316 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 LGALS14Q8TCE9 139 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 C15orf40Q8WUR7 153 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 PHF21AQ96BD5 680 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 DIABLOQ9NR28 239 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 HIF1ANQ9NWT6 349 aa13.03□□□□□ -0.32
SC5D-207ENST00000531140 TMEM30CPA0ZSE6 113 aa13.02□□□□□ -0.33
SC5D-207ENST00000531140 CCDC160A6NGH7 325 aa13.02□□□□□ -0.33
SC5D-207ENST00000531140 SIRPB1O00241 398 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms