RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 HOGA1Q86XE5 327 aa13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 ZBTB34Q8NCN2 500 aa13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 APOBEC4Q8WW27 367 aaKnown RBP13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 GPR27Q9NS67 375 aa13.58□□□□□ -0.24
PCDHA4-203ENST00000530339 A0A1W2PPC1 479 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 CRISP2P16562 243 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 ID4P47928 161 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 PTTG1IPP53801 180 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 NHLRC3Q5JS37 347 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 SSX8Q7RTT4 187 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 RFLNBQ8N5W9 214 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 ZPLD1Q8TCW7 415 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 SDHCQ99643 169 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 MCM3APO60318 1980 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 M0QZK8 103 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 CDK2AP1O14519 115 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 GGCTO75223 188 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 GAPDHP04406 335 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 KIR3DL2P43630 455 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 AMTP48728 403 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 ZNF154Q13106 437 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 C16orf47Q6ZP98 133 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 MRGPRGQ86SM5 289 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 RGP1Q92546 391 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 FBXO17Q96EF6 278 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 COL4A1P02462 1669 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 LRRC37AA6NMS7 1700 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 USF1P22415 310 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 AMMECR1Q9Y4X0 333 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 hADV38S2A0JD32 116 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 RNASEKQ6P5S7 137 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 FA2HQ7L5A8 372 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 TMEM230Q96A57 120 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 KLHDC2Q9Y2U9 406 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 MRPS18BQ9Y676 258 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 LY75O60449 1722 aa13.57□□□□□ -0.24
PCDHA4-203ENST00000530339 TRBV5-5A0A0J9YX44 114 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 OR5H1A6NKK0 313 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 HRKO00198 91 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 FCGR3BO75015 233 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 FSTP19883 344 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 LHX9Q9NQ69 397 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 SPINK4O60575 86 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 OR2Z1Q8NG97 314 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 BET1LQ9NYM9 111 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 GYPAP02724 150 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 CA6P23280 308 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 PTPMT1Q8WUK0 201 aaPredicted RBP13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 TRAV34A0A0B4J273 112 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 MYF5P13349 255 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 LBHQ53QV2 105 aaPredicted RBP13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 KHDC3LQ587J8 217 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 OR2T6Q8NHC8 308 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 ADAT3Q96EY9 351 aaPredicted RBP13.56□□□□□ -0.24
PCDHA4-203ENST00000530339 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 GEMIN2O14893 280 aaKnown RBP13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 RCC1P18754 421 aaPredicted RBP13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 LINC00518Q8N0U6 118 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 A0A1W2PN81 502 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 GAPTQ8N292 157 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 PSG11Q9UQ72 335 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 GPX7Q96SL4 187 aaPredicted RBP13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 AAMDCQ9H7C9 122 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 C11orf94C9JXX5 98 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 Q3ZCU0 254 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 RAB1BQ9H0U4 201 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 DUSP15Q9H1R2 295 aaPredicted RBP13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 TRPM6Q9BX84 2022 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 NKX2-6A6NCS4 301 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 OOEPA6NGQ2 149 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 FUT5Q11128 374 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 DPPA3Q6W0C5 159 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 OR4S2Q8NH73 311 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 WFDC6Q9BQY6 131 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 SLC26A1Q9H2B4 701 aa13.55□□□□□ -0.24
PCDHA4-203ENST00000530339 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
PCDHA4-203ENST00000530339 POM121Q96HA1 1249 aa13.54□□□□□ -0.24
PCDHA4-203ENST00000530339 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
PCDHA4-203ENST00000530339 BARX1Q9HBU1 254 aaPredicted RBP13.54□□□□□ -0.24
PCDHA4-203ENST00000530339 A0A1B0GTQ1 180 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms