RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CRIP3Q6Q6R5 217 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 BIVMQ86UB2 503 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SUMF2Q8NBJ7 301 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ZNRF1Q8ND25 227 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM104Q8NE00 496 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 OR5T2Q8NGG2 359 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 DEDD2Q8WXF8 326 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 S100ZQ8WXG8 99 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 CORO2AQ92828 525 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM186Q96B77 213 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 WDFY2Q96P53 400 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 CMSS1Q9BQ75 279 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 DCTN5Q9BTE1 182 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 NXF2Q9GZY0 626 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 GHITMQ9H3K2 345 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 RNF167Q9H6Y7 350 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TAS2R8Q9NYW2 309 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 PTTG2Q9NZH5 202 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TRAPPC2LQ9UL33 140 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 KCNS2Q9ULS6 477 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 KPTNQ9Y664 436 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 CREBBPQ92793 2442 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 NOTCH2Q04721 2471 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 MEIKINA0A087WXM9 373 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 TRBV6-6A0A0A6YYG2 114 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ODAMA1E959 279 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 F8VVB4 439 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 F8VWA3 439 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF205O95201 554 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 LPLP06858 475 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 CD99P14209 185 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 DTYMKP23919 212 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 CHATP28329 748 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 DUSP1P28562 367 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ARHGDIBP52566 201 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF45Q02386 682 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 PDCD1Q15116 288 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 Q3ZCU0 254 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 FAM201AQ5SY85 155 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 HACD4Q5VWC8 232 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 STEAP3Q658P3 488 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 PYHIN1Q6K0P9 492 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 BTN2A1Q7KYR7 527 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 RTN4RL2Q86UN3 420 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 NR2C2APQ86WQ0 139 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 CD177Q8N6Q3 437 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 FAM216BQ8N7L0 139 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 WFDC11Q8NEX6 87 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 BORCS5Q969J3 196 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 DIRAS2Q96HU8 199 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF714Q96N38 554 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 DCUN1D5Q9BTE7 237 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 SLIRPQ9GZT3 109 aaKnown RBP6.59□□□□□ -1.35
SSBP3-211ENST00000528787 PPA2Q9H2U2 334 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 NARFLQ9H6Q4 476 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 HEXA-AS1Q9H8Q6 139 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF107Q9UII5 783 aaPredicted RBP6.59□□□□□ -1.35
SSBP3-211ENST00000528787 RPUSD1Q9UJJ7 312 aaKnown RBP6.59□□□□□ -1.35
SSBP3-211ENST00000528787 MAB21L2Q9Y586 359 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 CCDC168Q8NDH2 2452 aa6.59□□□□□ -1.35
SSBP3-211ENST00000528787 POLQO75417 2590 aa6.59□□□□□ -1.36
SSBP3-211ENST00000528787 FBN2P35556 2912 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 DSCAML1Q8TD84 2053 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.58□□□□□ -1.364e-9■■■■■ 31.3
SSBP3-211ENST00000528787 TRAV18A0A075B6X5 111 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 TRAV24A0A0B4J272 114 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 IGHV2-70DA0A0C4DH43 119 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 RAB27BO00194 218 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 CD5LO43866 347 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 PAHP00439 452 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 TGFAP01135 160 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 MELTFP08582 738 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 INHBBP09529 407 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 GSTT2BP0CG30 244 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF728P0DKX0 622 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 TBPP20226 339 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 CDK2P24941 298 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 PRSS3P35030 304 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 OR3A1P47881 315 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 TAS2R46P59540 309 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 AP3S2P59780 193 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 ERVFRD-1P60508 538 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 EDDM3AQ14507 147 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 CDNFQ49AH0 187 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 OR10K2Q6IF99 312 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF841Q6ZN19 808 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF497Q6ZNH5 498 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 C17orf107Q6ZR85 190 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 GAPTQ8N292 157 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 C19orf18Q8NEA5 215 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 OR4S1Q8NGB4 309 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 OR52M1Q8NGK5 317 aa6.58□□□□□ -1.36
SSBP3-211ENST00000528787 OR13D1Q8NGV5 346 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms