RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 DHDHQ9UQ10 334 aa8.43□□□□□ -1.06
CPSF1-203ENST00000527916 TSSC4Q9Y5U2 329 aaPredicted RBP8.43□□□□□ -1.06
CPSF1-203ENST00000527916 A0A087X0M5 115 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 A0A1B0GX30 115 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 SIRPB1O00241 398 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 SLC33A1O00400 549 aaPredicted RBP8.42□□□□□ -1.06
CPSF1-203ENST00000527916 DEGS1O15121 323 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 MAGEB3O15480 346 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 OGG1O15527 345 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 MMP23AO75900 390 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 BAG2O95816 211 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 HCKP08631 526 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 CALCBP10092 127 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF44P15621 663 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 RAB3AP20336 220 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 HTR1DP28221 377 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 CD34P28906 385 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 RAB13P51153 203 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 BDH1Q02338 343 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 PAX5Q02548 391 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 AESQ08117 197 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 IL18R1Q13478 541 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 CDK5R1Q15078 307 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 TTC23Q5W5X9 447 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 UNQ9370/PRO34162Q6UXP9 181 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 ASCL4Q6XD76 172 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 TMPRSS11AQ6ZMR5 421 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 ABHD12Q8N2K0 398 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 OR51T1Q8NGJ9 327 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 OR5D18Q8NGL1 313 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF596Q8TC21 504 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 GPR148Q8TDV2 347 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 CREB3L1Q96BA8 519 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 OR6C3Q9NZP0 311 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
CPSF1-203ENST00000527916 LYSTQ99698 3801 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 ODAMA1E959 279 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 MEX3AA1L020 520 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF729A6NN14 1252 aaPredicted RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 IGLV1-47P01700 117 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 CD2P06729 351 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 CGB3P0DN86 165 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 CGB7P0DN87 165 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 GLIPR1P48060 266 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 ETV1P50549 477 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 GTF2A1P52655 376 aaPredicted RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 SNU13P55769 128 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 SCN1BQ07699 218 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 IL13RA2Q14627 380 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 SMN1Q16637 294 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 KRBOX4Q5JUW0 171 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 CENPVQ7Z7K6 275 aaPredicted RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 TRAPPC6BQ86SZ2 158 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 PACRGLQ8N7B6 248 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 ZNF565Q8N9K5 539 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 TSEN15Q8WW01 171 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 STMN2Q93045 179 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 COQ2Q96H96 371 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 BABAM2Q9NXR7 383 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 DIMT1Q9UNQ2 313 aaKnown RBP8.41□□□□□ -1.06
CPSF1-203ENST00000527916 HILPDAQ9Y5L2 63 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 HSPE1-MOB4S4R3N1 261 aa8.41□□□□□ -1.06
CPSF1-203ENST00000527916 LEUTXA8MZ59 168 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 CDK2P24941 298 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 CEACAM3P40198 252 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 PTGFRP43088 359 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 KCNJ3P48549 501 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 PRRX1P54821 245 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 ADARB1P78563 741 aaKnown RBP8.4□□□□□ -1.06
CPSF1-203ENST00000527916 SLC34A1Q06495 639 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 MED21Q13503 144 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 PLA1AQ53H76 456 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 NHLRC3Q5JS37 347 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 XAF1Q6GPH4 301 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 SETD9Q8NE22 299 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 OR4X2Q8NGF9 303 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 OR4D6Q8NGJ1 314 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 MUC7Q8TAX7 377 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 NDNFQ8TB73 568 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 CNIH3Q8TBE1 160 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 RGP1Q92546 391 aaPredicted RBP8.4□□□□□ -1.06
CPSF1-203ENST00000527916 TMEM106AQ96A25 262 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 BARHL1Q9BZE3 327 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 IFT22Q9H7X7 185 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 LINC00574Q9H8X3 128 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 IL36GQ9NZH8 169 aa8.4□□□□□ -1.06
CPSF1-203ENST00000527916 EXOSC1Q9Y3B2 195 aaKnown RBP8.4□□□□□ -1.06
CPSF1-203ENST00000527916 KBTBD11-OT1A0A1B0GTJ5 212 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 OOSP1A8MZH6 123 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 H0YJX3 145 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms